Gene Sfum_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2393 
Symbol 
ID4459310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2954067 
End bp2955176 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content62% 
IMG OID639703158 
ProductABC-2 type transporter 
Protein accessionYP_846509 
Protein GI116749822 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAA GAATCCATGC CCTGACGATC AAGGAATTCC TGGCCCTGCT CAAAGACAGG 
AAAAGCAGGG TCGTGATCAT CATCCCGCCG CTCATCCAGC TTTTCGTCTT CAGCTATGCC
GCGACCTACG ACCTGAAGGA AGTCCCGTTT GCCGTGTACA ACGAAGACAC CGGAGAAGCG
GCACGGGAGC TCATTGCCGG CTTCCGCGAC TCACCCACTT TCCGGCAGGC GGCGGAGATC
GCCCGCGATT CGGAAATCGC TCCCCTGATC GACGGGAAGG ATGTGCTCCT GGTCCTGCGC
ATCGGACAAC GGTTCACCGA AGACCTGCTG GCCGGCCGGC CCGCATCGGT GCAGGTGCTC
ATCGACGGCC GCAACTCCAA TACCGCATCC ATCGCCCTTT CCTACGCCAG GGCTATCGTG
GGATCGTTCA ACACCCGGTG GGCGGAACGC AGGGGCCTGC AGGGATTCCC GGCCACACTC
GACGTGCGCG CCTGGTTCAA TCCGAATTTC GACAGCCTCT GGTTCATCGC CCCCGGCATC
GTCGGAACGC TCACACTGGT GGTCACTCTC CTGGTCACCG CCCTTTCCGT GGCGCGCGAA
CGCGAACAGG GCACCTTCGA CCAGCTTCTC GTGACGCCGT TGCGTCCCTT TGAAATCCTT
GTCGGGAAAG CGCTTCCCGG GATGATCATC GGCACCTTCG AAGCCACGCT GATCATTGTC
GCGGCGGTGT TGTGGTTTCA AATACCGTTG CGAGGCAGCC TCCTCACGCT CTATACCGGT
ATCTCGTTCT TCCTGCTCTC GGCGGTCGGG ATGGGGCTCC TGATCTCCTC CCTGGCCGTG
ACCCAGCAGC AGGGGTTGCT CGGCGCCTTC ATGTTCCTGG TGCCGGCCAT CATCCTCTCG
GGTTTCGCCA CCCCCATCGC CAACATGTCG CCCCCCGTGC AGGTGCTCAC CCTGCTCAAT
CCCATGCGCT ATTTCATGGT GATTCTCCGA AGCGTATTCA TCGAGGGGAC CCCTTTCGGC
CTGCTCCTGG ACCAGTTCTG GCCAATGGCG GTGATCGGCG TTGCGGCCTT GACACTCGCC
GCCGCGTTGT TCCGCAAGCG GATGTACTGA
 
Protein sequence
MWKRIHALTI KEFLALLKDR KSRVVIIIPP LIQLFVFSYA ATYDLKEVPF AVYNEDTGEA 
ARELIAGFRD SPTFRQAAEI ARDSEIAPLI DGKDVLLVLR IGQRFTEDLL AGRPASVQVL
IDGRNSNTAS IALSYARAIV GSFNTRWAER RGLQGFPATL DVRAWFNPNF DSLWFIAPGI
VGTLTLVVTL LVTALSVARE REQGTFDQLL VTPLRPFEIL VGKALPGMII GTFEATLIIV
AAVLWFQIPL RGSLLTLYTG ISFFLLSAVG MGLLISSLAV TQQQGLLGAF MFLVPAIILS
GFATPIANMS PPVQVLTLLN PMRYFMVILR SVFIEGTPFG LLLDQFWPMA VIGVAALTLA
AALFRKRMY