Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2393 |
Symbol | |
ID | 4459310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2954067 |
End bp | 2955176 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703158 |
Product | ABC-2 type transporter |
Protein accession | YP_846509 |
Protein GI | 116749822 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAAAA GAATCCATGC CCTGACGATC AAGGAATTCC TGGCCCTGCT CAAAGACAGG AAAAGCAGGG TCGTGATCAT CATCCCGCCG CTCATCCAGC TTTTCGTCTT CAGCTATGCC GCGACCTACG ACCTGAAGGA AGTCCCGTTT GCCGTGTACA ACGAAGACAC CGGAGAAGCG GCACGGGAGC TCATTGCCGG CTTCCGCGAC TCACCCACTT TCCGGCAGGC GGCGGAGATC GCCCGCGATT CGGAAATCGC TCCCCTGATC GACGGGAAGG ATGTGCTCCT GGTCCTGCGC ATCGGACAAC GGTTCACCGA AGACCTGCTG GCCGGCCGGC CCGCATCGGT GCAGGTGCTC ATCGACGGCC GCAACTCCAA TACCGCATCC ATCGCCCTTT CCTACGCCAG GGCTATCGTG GGATCGTTCA ACACCCGGTG GGCGGAACGC AGGGGCCTGC AGGGATTCCC GGCCACACTC GACGTGCGCG CCTGGTTCAA TCCGAATTTC GACAGCCTCT GGTTCATCGC CCCCGGCATC GTCGGAACGC TCACACTGGT GGTCACTCTC CTGGTCACCG CCCTTTCCGT GGCGCGCGAA CGCGAACAGG GCACCTTCGA CCAGCTTCTC GTGACGCCGT TGCGTCCCTT TGAAATCCTT GTCGGGAAAG CGCTTCCCGG GATGATCATC GGCACCTTCG AAGCCACGCT GATCATTGTC GCGGCGGTGT TGTGGTTTCA AATACCGTTG CGAGGCAGCC TCCTCACGCT CTATACCGGT ATCTCGTTCT TCCTGCTCTC GGCGGTCGGG ATGGGGCTCC TGATCTCCTC CCTGGCCGTG ACCCAGCAGC AGGGGTTGCT CGGCGCCTTC ATGTTCCTGG TGCCGGCCAT CATCCTCTCG GGTTTCGCCA CCCCCATCGC CAACATGTCG CCCCCCGTGC AGGTGCTCAC CCTGCTCAAT CCCATGCGCT ATTTCATGGT GATTCTCCGA AGCGTATTCA TCGAGGGGAC CCCTTTCGGC CTGCTCCTGG ACCAGTTCTG GCCAATGGCG GTGATCGGCG TTGCGGCCTT GACACTCGCC GCCGCGTTGT TCCGCAAGCG GATGTACTGA
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Protein sequence | MWKRIHALTI KEFLALLKDR KSRVVIIIPP LIQLFVFSYA ATYDLKEVPF AVYNEDTGEA ARELIAGFRD SPTFRQAAEI ARDSEIAPLI DGKDVLLVLR IGQRFTEDLL AGRPASVQVL IDGRNSNTAS IALSYARAIV GSFNTRWAER RGLQGFPATL DVRAWFNPNF DSLWFIAPGI VGTLTLVVTL LVTALSVARE REQGTFDQLL VTPLRPFEIL VGKALPGMII GTFEATLIIV AAVLWFQIPL RGSLLTLYTG ISFFLLSAVG MGLLISSLAV TQQQGLLGAF MFLVPAIILS GFATPIANMS PPVQVLTLLN PMRYFMVILR SVFIEGTPFG LLLDQFWPMA VIGVAALTLA AALFRKRMY
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