Gene Sfum_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2392 
Symbol 
ID4459309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2952894 
End bp2954057 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content62% 
IMG OID639703157 
ProductFis family transcriptional regulator 
Protein accessionYP_846508 
Protein GI116749821 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.76466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGG TCGATACGGA CACATTCCCG GACCGGTCGC CGCGCGGCGG CAAAAGCATG 
CGCCTTCGAG GGTTGATCCG CAAGGAGTTC CTCCAGATCG TGCGTGACCC GAGCAGTATC
GGTATCGCCT TCCTGATGCC TCTGGTGCTG TTGTTCATAT TCGGCTATGG GGTGTCCCTG
GACGCCCGGG ACGTTCCCAT CGCCCTCGTG GTGGAACAAC CGAACGCGGA CACCTCAGCG
CTGACCGGTT CCTTTTTCGG ATCGCCCTAC TTCAAGCCGG TCCCGATGTT CGGCATGCAC
GAAGCCGTGC GCGAGCTCAT GTCCCACCGG GTGGACGGAA TCGTTCATCT GCGCGAAGAT
TTTTCGAAAC GGCTGCGGCA GCCGGGCGGA GCATCGATCC AGGTGATCGT CAACGGTATG
GACGCCAACA CGGCAAGGCT CATTGCAGGC TACGTGGAAG GCGCCTGGGG AGGCTGGCTG
GAACGCCGGG CCGTCGAAAC CGGGACGGTC CTGCCCATGC CCGTTCAGGT CGAACACCGG
GTGTGGTTCA ATCCCGAGAT TCGGAGCCAG AACTTCCTGG TGCCGGGGCT GGTCGCCGTG
ATCATGGCCC TGATCGGGGC CTTGCTGACC GCGCTGGTGA TTTCGCGCGA ATGGGAACGG
GGAACCATGG AAGCGCTCCT GATCAGCCCG GTTTCCATGG GTGAAATACT GCTCGGCAAG
CTCATCCCCT ATTTCCTGCT CGGCATGGGC GGAATGATTC TCTCGGTGGC CATGGCGGTA
TTCCTGTTCG ACGTCCCTCT GCGCGGCTCG ATCTGGGTGC TGTTCGTCAC GTCTTCCCTG
TTCCTCCTCG CCATGCTCGG CATGGGGTTG TTGATTTCGA CCGTGGCCAA GAGTCAGTTC
GTGGCAAGCC AGGCCGCCAT CATCGGCACG TTTCTGCCGG CCTTCCTGCT CTCCGGCTTC
ATCTTCGATA TCGGCAGCAT GCCGCCGGTC GTCCGGACCA TCACCAGGCT TTTCGCCGCG
AGATATTTCG TGGCCATTCT CCAAACCCTC TTTCTCGCAG GCAACGTGTG GTCGGTGATC
CTGCCGAACG CGTTTGCCCT GCTCGTGATG GCCGCCTTTT TCCTGGGGCT GACCCGGCGC
AGATCCCGCA AGCGACTCGA ATAG
 
Protein sequence
MNAVDTDTFP DRSPRGGKSM RLRGLIRKEF LQIVRDPSSI GIAFLMPLVL LFIFGYGVSL 
DARDVPIALV VEQPNADTSA LTGSFFGSPY FKPVPMFGMH EAVRELMSHR VDGIVHLRED
FSKRLRQPGG ASIQVIVNGM DANTARLIAG YVEGAWGGWL ERRAVETGTV LPMPVQVEHR
VWFNPEIRSQ NFLVPGLVAV IMALIGALLT ALVISREWER GTMEALLISP VSMGEILLGK
LIPYFLLGMG GMILSVAMAV FLFDVPLRGS IWVLFVTSSL FLLAMLGMGL LISTVAKSQF
VASQAAIIGT FLPAFLLSGF IFDIGSMPPV VRTITRLFAA RYFVAILQTL FLAGNVWSVI
LPNAFALLVM AAFFLGLTRR RSRKRLE