Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2392 |
Symbol | |
ID | 4459309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2952894 |
End bp | 2954057 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703157 |
Product | Fis family transcriptional regulator |
Protein accession | YP_846508 |
Protein GI | 116749821 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.76466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGG TCGATACGGA CACATTCCCG GACCGGTCGC CGCGCGGCGG CAAAAGCATG CGCCTTCGAG GGTTGATCCG CAAGGAGTTC CTCCAGATCG TGCGTGACCC GAGCAGTATC GGTATCGCCT TCCTGATGCC TCTGGTGCTG TTGTTCATAT TCGGCTATGG GGTGTCCCTG GACGCCCGGG ACGTTCCCAT CGCCCTCGTG GTGGAACAAC CGAACGCGGA CACCTCAGCG CTGACCGGTT CCTTTTTCGG ATCGCCCTAC TTCAAGCCGG TCCCGATGTT CGGCATGCAC GAAGCCGTGC GCGAGCTCAT GTCCCACCGG GTGGACGGAA TCGTTCATCT GCGCGAAGAT TTTTCGAAAC GGCTGCGGCA GCCGGGCGGA GCATCGATCC AGGTGATCGT CAACGGTATG GACGCCAACA CGGCAAGGCT CATTGCAGGC TACGTGGAAG GCGCCTGGGG AGGCTGGCTG GAACGCCGGG CCGTCGAAAC CGGGACGGTC CTGCCCATGC CCGTTCAGGT CGAACACCGG GTGTGGTTCA ATCCCGAGAT TCGGAGCCAG AACTTCCTGG TGCCGGGGCT GGTCGCCGTG ATCATGGCCC TGATCGGGGC CTTGCTGACC GCGCTGGTGA TTTCGCGCGA ATGGGAACGG GGAACCATGG AAGCGCTCCT GATCAGCCCG GTTTCCATGG GTGAAATACT GCTCGGCAAG CTCATCCCCT ATTTCCTGCT CGGCATGGGC GGAATGATTC TCTCGGTGGC CATGGCGGTA TTCCTGTTCG ACGTCCCTCT GCGCGGCTCG ATCTGGGTGC TGTTCGTCAC GTCTTCCCTG TTCCTCCTCG CCATGCTCGG CATGGGGTTG TTGATTTCGA CCGTGGCCAA GAGTCAGTTC GTGGCAAGCC AGGCCGCCAT CATCGGCACG TTTCTGCCGG CCTTCCTGCT CTCCGGCTTC ATCTTCGATA TCGGCAGCAT GCCGCCGGTC GTCCGGACCA TCACCAGGCT TTTCGCCGCG AGATATTTCG TGGCCATTCT CCAAACCCTC TTTCTCGCAG GCAACGTGTG GTCGGTGATC CTGCCGAACG CGTTTGCCCT GCTCGTGATG GCCGCCTTTT TCCTGGGGCT GACCCGGCGC AGATCCCGCA AGCGACTCGA ATAG
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Protein sequence | MNAVDTDTFP DRSPRGGKSM RLRGLIRKEF LQIVRDPSSI GIAFLMPLVL LFIFGYGVSL DARDVPIALV VEQPNADTSA LTGSFFGSPY FKPVPMFGMH EAVRELMSHR VDGIVHLRED FSKRLRQPGG ASIQVIVNGM DANTARLIAG YVEGAWGGWL ERRAVETGTV LPMPVQVEHR VWFNPEIRSQ NFLVPGLVAV IMALIGALLT ALVISREWER GTMEALLISP VSMGEILLGK LIPYFLLGMG GMILSVAMAV FLFDVPLRGS IWVLFVTSSL FLLAMLGMGL LISTVAKSQF VASQAAIIGT FLPAFLLSGF IFDIGSMPPV VRTITRLFAA RYFVAILQTL FLAGNVWSVI LPNAFALLVM AAFFLGLTRR RSRKRLE
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