| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2388 |
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| Symbol | |
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| ID | 4459305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2947834 |
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| End bp | 2949441 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639703153 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_846504 |
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| Protein GI | 116749817 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.219764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAATC AAAAGCCCAG AGCCCCGCTC TCGACAAGTC GGGACAGGCT TGGCGAATTC
CTCGATTCGC CGGAAGAGAG GATGGAGCTG CTGGTCCGGA TCATGGACGC TCTTCCCGTT
TCCATCACGT ATGTGAATCC CCGTCAATGC TACGTATTCT CTAACAAGAC CTGTGAAAAA
TGGTTCGGAC GTTGCCTCGA CGACATCCGG GGCAGGCACG TCAGTGATGT GCTGGGGCCG
GAGCTCTACG AGGAGGCCCG GTTCGGCGTG GAATCCGCGC TCGCCGGGAA AGCGGTGTCC
TACGAGCGTT CCGTGCCGTT CAGGGACGGT GCCCTGCAGA GAATCGCGAC GAGCTTCATA
CCTCACAAAG ACGCCCGAGG CGAGCTCAGG GGATTCTTCA CCCTCGAGGT CGACGTCACT
TACCTCAACG AATGCAAGCA AACCGAGGAA AAACTCCAGA CATCCCATCA GCAGCTGCTG
GACATCATCG AATTCCTCCC GGACGCAACA TTCGTGATCG ATCGGGAAAG ACGCGTCATC
GCCTGGAACC GCGCCATCGA AACGATGACG GGCCTGCGTA AGTCGGAGAT CCTGGGCAGA
GGGGACTTCG CCTACGCCGT TCCTTTTTAC GGTCGGCCGC GGCCGATATT GATCGACCTG
GTCATGAACG ACCGGATCGA TCTGGAGGAA TGCTACGATT TCATCGAGCG GAAAGGAAAC
ACGGTTTTCG GTGAAGTGCT GGTACCCAAC GCCTATGAAG GAAAGGGCGC TTACTTGTGG
GGCACTGCTT CTCCGCTGTT TGACGTCAAG GGCGACATCA TCGGTGCCAT CCAATCGATT
CGCGACATCA CCGATCGGAA GAGGGCCCGG GATGCGCTGC TCGAGTCCGA ACGGCAGCTT
CGGAACCTGT CCGCTCAACT GTTACGTGCG CACGAGGAGG AACGGAAGCG AATCGCCAGG
GAGTTGCACG ACAGCACGGG ACAATCCCTT GCGGCCCTCA AATTCTACGT GGACAACGCC
CTGAACATGA AAGAGCGGGG CAAACCCGAT GAGATGGCCA ACTGCCTCGA CCGCATGGTC
CCTCTGATTC GGAACGCCAT CGAAGAAGCA CGGCGGATCT ATATGGGGCT CAGGCCTTCC
ATCCTGGACG ATCTCGGGAT CATCGCCACC ATTCAGTGGT ATTGCCGGGA AGTACAGAAG
ACGTGTCCGA AGACGAACAT CCTGGAACGG ATCGACGTTC AGGAAGACAA GATCCCTGAA
GACATCAAGA TCGTCATTTT CAGACTGGTT CAAGAATCGC TCAACAACAT CATCAAGTAC
GGCAAGGCAG AAAGGGTGAC GATCTCCCTG GTGAGTACCT CATCCGCCAT AGAACTGATC
GTTCAGGACA ACGGCGTGGG TTTCGATCTC GATGCGTACC TGCACACGGA AAACCGAAAT
CGGGGGTTGG GGCTTGCCGG GATGCGGGAG CGGATGGAGC TTTCCGGGGG GACGTTTTCG
ATTCAATCGA TCATCGGCGA AGGAACGACG ATCCGGGCCG TCTGGCCCGT CTCCGTTCGA
GAATGCGACG CTCGGCCGTG TCGGGCTTCG TCTTACGAAC CGCCATGA
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| Protein sequence | MQNQKPRAPL STSRDRLGEF LDSPEERMEL LVRIMDALPV SITYVNPRQC YVFSNKTCEK
WFGRCLDDIR GRHVSDVLGP ELYEEARFGV ESALAGKAVS YERSVPFRDG ALQRIATSFI
PHKDARGELR GFFTLEVDVT YLNECKQTEE KLQTSHQQLL DIIEFLPDAT FVIDRERRVI
AWNRAIETMT GLRKSEILGR GDFAYAVPFY GRPRPILIDL VMNDRIDLEE CYDFIERKGN
TVFGEVLVPN AYEGKGAYLW GTASPLFDVK GDIIGAIQSI RDITDRKRAR DALLESERQL
RNLSAQLLRA HEEERKRIAR ELHDSTGQSL AALKFYVDNA LNMKERGKPD EMANCLDRMV
PLIRNAIEEA RRIYMGLRPS ILDDLGIIAT IQWYCREVQK TCPKTNILER IDVQEDKIPE
DIKIVIFRLV QESLNNIIKY GKAERVTISL VSTSSAIELI VQDNGVGFDL DAYLHTENRN
RGLGLAGMRE RMELSGGTFS IQSIIGEGTT IRAVWPVSVR ECDARPCRAS SYEPP
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