Gene Sfum_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2381 
Symbol 
ID4459332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2939284 
End bp2940207 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID639703146 
Productpeptidase M48, Ste24p 
Protein accessionYP_846497 
Protein GI116749810 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGT GTTCAAGGTT CTCGGTCCCT GTGTTTGTCC TGGCCACGCT CTGCCTGGCG 
TTGTCGCTTT CGATCCGCGA CTGTCGCGCC GCGAGCCTGG GCGACGTCCT CCGCATCCCG
GGAGGCGTAG TCAATTCGGG CCAGGCCGAT TCCATCGTGC GCGGCGCCAA GGCGATCGGG
AAAACGTTCC AGGACATTAC CCCGGAACAG GAATACTACA TCGGGCGCGC CGTGGCGGCG
ACCATCCTGC AGAGCTATCG CCCCTATCCC GACGAGGAAG CCAACCGGTA CCTCAACGTG
CTCGGACAAT CGCTCGCCCA GGCGTCGGAC CGCCCGGAAA CATTCGGCGG CTATCACTTT
TTGATCCTGG ATTCGGAGGA AATCAACGCG TTCGCGGCCC CGGGCGGCTT GATCCTGGTC
ACCCGCGGGA TGCTGCGCCT GTGCCGGGAT GAAGACCAGG TGGCGGCCGT GCTCGCTCAC
GAGATCGGTC ACATCAAGGG TCGGCACGGG CTGCGGGCCA TCAGGACGAG TCGGCTGACG
ACCGCGTTCA CCGTTCTGGC CGCCGAAGGC GCCAAGAATT TCGGGGGGAG CCAGGTGGCC
CAGCTGACGG AAGCCTTTGA GGGATCGGTG AGCGATGTCA CGGCGACTTT GACCAACAGC
GGGTATTCCA GGGAACTCGA ACGGGAGGCG GACCAGGAAG CCGTCGCAAT CCTGATCCGG
ATCGGATACG ATCCCGGCGC ATTGAGCTCC ATGCTCCAGG AGATGGACAA ACGCATGGTG
CGAAGCGGTC CGGGTTTTGC CAAGACGCAT CCCGATCCCA AAGACCGGGT CCAGGCCATC
GGGGCCAGGG CCGGAACATC GTCCCGGACC GCACCGCCTC CGGAGAGAAA GAAGCGTTTC
GACCTCTTCA TGAGCAAAGT GTAG
 
Protein sequence
MRLCSRFSVP VFVLATLCLA LSLSIRDCRA ASLGDVLRIP GGVVNSGQAD SIVRGAKAIG 
KTFQDITPEQ EYYIGRAVAA TILQSYRPYP DEEANRYLNV LGQSLAQASD RPETFGGYHF
LILDSEEINA FAAPGGLILV TRGMLRLCRD EDQVAAVLAH EIGHIKGRHG LRAIRTSRLT
TAFTVLAAEG AKNFGGSQVA QLTEAFEGSV SDVTATLTNS GYSRELEREA DQEAVAILIR
IGYDPGALSS MLQEMDKRMV RSGPGFAKTH PDPKDRVQAI GARAGTSSRT APPPERKKRF
DLFMSKV