| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2378 |
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| Symbol | |
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| ID | 4459329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2931823 |
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| End bp | 2933352 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639703143 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_846494 |
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| Protein GI | 116749807 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.43897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGAGA TTGTGCTCGG CGTGGACGGA ATGACCCTGG AAGACCTCGA GGCCATCGCC
CGGGGCGGCG TCCGGGTCCG CCTGAGCGGA GAGTCCGAGG AGCGCATCGT ACGGTCCCAC
GGCCTGGTGC GGCGATGGAT CGAGGAGGGG AGAATCATCT ACGGCGTGAC GACGGGCTTC
GGAGCCCTGA GCAACGTCAC GATCCCACCG GCGGAGACCA GGATTTTGCA GGAGAACATC
CTCATGAGTC ATGCGGCGGG CGTCGGCCGT CCGCTGGACG AGGAAACCGT GCGCGCGATC
ATGGCGCTCC GGGTCAAAGC GCTTGCCAGG GGCCAATCGG GCATCCGGCT CGAAACCGTC
CGGAGGCTGG CGGATATGCT CAACCGCGGA ATCCACCCGG TCATTCCGGA AAAGGGATCG
GTGGGCGCGA GCGGCGACCT GGCCCCGCTG GCGCACCTCG CTCTCGTGCT CATCGGGCGC
GGGGAAGCCT TCCACGAAGG AAACCGAATG CGGGGAGCGC AAGCCCTGCG CCGATGCGGC
ATAGCGCCGC TTCGGCTGGA AGCCGGGGAA GGCCTTGCCC TGGTGAACGG CACGCAGATG
ACCACGGCCA TCGGCGCCCT GGCGGTCTAT GATGCCGCGC GCCTCGCCAA ACTGGCCGAT
ATCGCGGCAG CCATGAGCCT TGAGGTCCTC CTGGGGAGCA GAACCGAGTT CGACCCGAGA
ATCCACGAAG TCCGGCCTCA CCCCGGTCAG ATTGCAGCGG CGGACAACCT GCGCAGAATA
ACGTCGAACA GCGAAATCAT ATCTTCCCAC AAGGACTGCA ACCGAGTCCA GGACGCCTAC
ACGCTCCGGT GCTCACCACA GGTTCACGGC GCGAGCAGGG ACGCCATCGA CTATGCGGCA
CGGGTGGTAG TGACCGAAAT GAATGCTTCC ACGGACAATC CCCTGATCTT TCCGGACACG
GAGGAATTCC TCCTGGGGGG TAACTTTCAC GGTCAGCCCG TGGGTCTGGC CCTCGACTTT
CTGTGCATGG CCGTGGCGGA GCTGGCCGGC ATTTCCGAGA GGCGCATCGA ACGGCTCGTA
AACCCTCAGT TGAGCGGCCT TCCGGCCTTC CTGGTGAGCG AAGGAGGATT GAACTCGGGA
TTCATGCTGG CCCAGTACAC GGCGGCGGCG CTCGTGTCGG AAAACAAAGT GCTCGCGCAC
CCGGCCACGG TGGATTCCAT TCCGACCTCG GCGAACAAGG AGGACCACGT GTCGATGAGT
CCCATTGCGG CCCGCAAATG CCGCGAGGCG CTGACGAATG CCGAGTTCGT GATCGCCGTG
GAACTGCTCT GCGGAGCGCA GGCCCTCGAC CTCTTCACCA ACGTCAAGCC GGGCTCGGGG
ACCCTCGCCG CCTACGAATG CATCCGCCGA ACCGTTCCGC ACCTCGAAAA AGACCGGGTA
TTGTCCGAGG ACATCCACGC CATGGCTCGT CTCATGAGAA GCGGGACGAT TCTCAAGGAA
GTCGAAACCG CAGTGGGAAG ATTGTGCTAA
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| Protein sequence | MREIVLGVDG MTLEDLEAIA RGGVRVRLSG ESEERIVRSH GLVRRWIEEG RIIYGVTTGF
GALSNVTIPP AETRILQENI LMSHAAGVGR PLDEETVRAI MALRVKALAR GQSGIRLETV
RRLADMLNRG IHPVIPEKGS VGASGDLAPL AHLALVLIGR GEAFHEGNRM RGAQALRRCG
IAPLRLEAGE GLALVNGTQM TTAIGALAVY DAARLAKLAD IAAAMSLEVL LGSRTEFDPR
IHEVRPHPGQ IAAADNLRRI TSNSEIISSH KDCNRVQDAY TLRCSPQVHG ASRDAIDYAA
RVVVTEMNAS TDNPLIFPDT EEFLLGGNFH GQPVGLALDF LCMAVAELAG ISERRIERLV
NPQLSGLPAF LVSEGGLNSG FMLAQYTAAA LVSENKVLAH PATVDSIPTS ANKEDHVSMS
PIAARKCREA LTNAEFVIAV ELLCGAQALD LFTNVKPGSG TLAAYECIRR TVPHLEKDRV
LSEDIHAMAR LMRSGTILKE VETAVGRLC
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