Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2350 |
Symbol | |
ID | 4459371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2885954 |
End bp | 2888377 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703115 |
Product | glycoside hydrolase family protein |
Protein accession | YP_846466 |
Protein GI | 116749779 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGCT ACGTGTGTAT CCATGGCCAT TTCTATCAGC CTCCTCGTGA AAACCCCTGG CTCGGCGAGG TGGAGCTCCA GGACTCGGCT TACCCCTTTC ATGACTGGAA CGAGAAGATC GCGGCCCAGT GCTACGCCCC GAACGCCGCC TCACGGATCC TCGACCATGA GCAGCGGATC ATCCGGATCG TCAACAACTA CTCGAAGATC AGCTTCAATT TCGGGCCGAC GCTCCTCTCC TGGATGGAAC GACACCGGCC GGAAACTCAC GAGGCCATCG TCGAAGCGGA TCGACTGAGC CGGTCGAGGT TTTCGGGGCA CGGTTCGGCC CTGGCCCAGG TCTACAACCA CATGATCATG CCCCTGGCCA ACGAGCGGGA CAAGTACACT CAAGTCACTT GGGGAATCGA GGATTTCAGG AGACGATTCG GACGAGACCC GGAAGGAATG TGGCTCCCGG AGTGCGCCGT CGACACGCGA TCCCTGGAAG TTCTGGCCGA ACTGGGAATC CGCTTCACCG TCCTCGCGCC CAGGCAGGCT GCAAATGTTC GCAGGCTCCT CCCGGAAGCG GATTGGGAAA ACGTGGAAGA CGCCCGAATC GATCCGACCA CGGTCTACCT GTGCCGGTTG CCGTCGGGCA GGTCCATCAG CCTGTTCTTC TATGACGGCC CCATTTCCCG GGAAATCGCT TTTTCGGGGT TGCTGAGCAA CGGCCAGTCG CTTGCCGAAA GACTCATAAG CGCATTCGAT GACGCCAGGG ACCGGCCCCA GTTGGTGCAC GCGGCCGTCG ACGGAGAAAC CTTCGGTCAC CACCAGCGAC ACGGCGACAT GGCGTTGGCC TACTGTCTTC ATTTCGTCGA ATCCGGGGAG CACGCGCAGC TGACCAACTA TGGAGAGTTC CTGGAAAAGA ATCCTCCGAC CCATGAGGTT GAAATCTACG ACAACTCGTC ATGGAGCTGC ATACACGGAA TAGAGCGCTG GCGCGAGAAC TGTGGCTGTC ATACCGGCAT GCACGGCGGG TGGACCCAGT CGTGGAGAGG CCCTCTGCGA CATTCGATGG ACCGGTTGAG AGACGAGGCC GCCCTGGCCT TCGAGGAGGT CGGTTCTCAG TTCCTGCGGT CTCCCTGGGA AGCCAGAAAC CGGTACATCG AGGTGGTCCT GGACCGTTCT CCGGAGAATG TGGAACGATT CCTCGCCAAC CACACGGTGC GCGCGCTCGA CCGATACGAG AAGGTCCAGG TTCTGCAGCT CCTCGAGATG CAGCACAATG CCATGCTGAT GTACACCAGC TGCGGCTGGT TCTTTGACGA GATCTCGGGA GTCGAGAGCG TTCAGGTCTT GCAGTATGCG GCGCGAGTCG CTCAATTCGT GGAGCTTCTG ACCGGCACCC CCGTGGAAGA GGACTTTGCG GGACGGCTGG AGGCGGCGCC CAGCAATCTC TTCGGGAACG GAGCCAGGGT CTACGAAATG TTCGTCAGGC CCGCGCGGCT GGATCTGCTC CGGGTCGGAG TCCATTACGC CGTCTCCACG CTTTTTGAAG ACTACCCCGA TGAAACCCCG ATCTATTCCT ACACGATTCG ACGAGAATGC CATGAGACCA TGGAAGCCGG CAGACTGAGG CTTGCCATAG GGAGGGCGGT GGTCCGTTCG AACATCATCT GGAGTGAAGA GACCGTCAGT TACGCGGTCC TGCACCTCGG CGACCACAAC ATCAGCGGCG GCGGGAGGGT GTTTCGGGGC GACGATGCTT ACACCCTCAT GGAAAGCGAG ATTCGGTCGG CCTTCGACAG GGCCGACGTT CCCGAAGTGA TCCGGCTCAT GGACAAGCAC TTCGGCACGA ACAACTTCTC CCTTTGGCAC CTGTTCAGGG ATGAACAAAG AAAAGTCATC GACCAGATCC TGGCCCTGAC CTACAGCGAC ATCGAAGCGT CCTATCGCCG GATATTCGAG AACACGCACG CCGTGATGAA CTTCCTTCAG GGCCTGCAGG TGCCTCTTCC CAAGTTCATC CTGGCGGCCG CCGAGAGGAT CGTCAACCTC GACCTCGCGC GGCTCTTTGA AACGGAAGCG ATGGACCACG CGAGACTGGA GTCTCTCCTC TCCGTCGCTC AACGCTGGGG GCTCGATCTG GACCGTGAAA AGCTCGGCTT CAATGCGGGC GCGTGGATCA CCGGCGCCAT GGAAAGACTC CTGGAAAATC CCGAGGAAAA GGAACGCATG GAAGAAATCG CCCGCGTCCT CGGCCTGTTG CAGGCGGCGG CCGTGCCGTT GGACCTCTGG GGGGCTCAGA ACCTTTACTA CTCCCTGGGT GAGTCAACCC ACGGGAGGAT GAAGAACGAG GCGGGGGGTC GAGGCGAGTC CGCCGAGGAA TGGGTCCGTT CCTTCGATCA GCTCGGACGC CACCTGAACG TGGTGATGCC ATGA
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Protein sequence | MTRYVCIHGH FYQPPRENPW LGEVELQDSA YPFHDWNEKI AAQCYAPNAA SRILDHEQRI IRIVNNYSKI SFNFGPTLLS WMERHRPETH EAIVEADRLS RSRFSGHGSA LAQVYNHMIM PLANERDKYT QVTWGIEDFR RRFGRDPEGM WLPECAVDTR SLEVLAELGI RFTVLAPRQA ANVRRLLPEA DWENVEDARI DPTTVYLCRL PSGRSISLFF YDGPISREIA FSGLLSNGQS LAERLISAFD DARDRPQLVH AAVDGETFGH HQRHGDMALA YCLHFVESGE HAQLTNYGEF LEKNPPTHEV EIYDNSSWSC IHGIERWREN CGCHTGMHGG WTQSWRGPLR HSMDRLRDEA ALAFEEVGSQ FLRSPWEARN RYIEVVLDRS PENVERFLAN HTVRALDRYE KVQVLQLLEM QHNAMLMYTS CGWFFDEISG VESVQVLQYA ARVAQFVELL TGTPVEEDFA GRLEAAPSNL FGNGARVYEM FVRPARLDLL RVGVHYAVST LFEDYPDETP IYSYTIRREC HETMEAGRLR LAIGRAVVRS NIIWSEETVS YAVLHLGDHN ISGGGRVFRG DDAYTLMESE IRSAFDRADV PEVIRLMDKH FGTNNFSLWH LFRDEQRKVI DQILALTYSD IEASYRRIFE NTHAVMNFLQ GLQVPLPKFI LAAAERIVNL DLARLFETEA MDHARLESLL SVAQRWGLDL DREKLGFNAG AWITGAMERL LENPEEKERM EEIARVLGLL QAAAVPLDLW GAQNLYYSLG ESTHGRMKNE AGGRGESAEE WVRSFDQLGR HLNVVMP
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