Gene Sfum_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2346 
Symbol 
ID4459367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2881352 
End bp2881639 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content56% 
IMG OID639703111 
Productchaperonin Cpn10 
Protein accessionYP_846462 
Protein GI116749775 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00216658 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCA GACCATTGCA TGATCGCATC ATCATCAGAC GTGTCGAGGA AGAGGAAACA 
ACGGCGGGTG GAATCATCAT TCCGGATACC GCCAGGGAAA AGCCTCAACA GGGGAAAGTC
GTGGCGGCGG GCAAGGGCCG GCTGCTCGAA AATGGGATCC TCACTCCGCT TGCGGTCAAG
GAGGGGGATC TCGTTCTGTT CAACAAGTAC TCCGGGACGG ACGTGAAGAT CGAGGGCGAG
GACCTTCTGA TCATGCACGA AGACGACGTC CTGGGGATCA TCGAATAG
 
Protein sequence
MKVRPLHDRI IIRRVEEEET TAGGIIIPDT AREKPQQGKV VAAGKGRLLE NGILTPLAVK 
EGDLVLFNKY SGTDVKIEGE DLLIMHEDDV LGIIE