| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2345 |
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| Symbol | |
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| ID | 4459366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2879688 |
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| End bp | 2881316 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703110 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_846461 |
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| Protein GI | 116749774 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000515051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCA AGGAAATCAA GTACTACGCC GAGGCCAGGG AAAAGATCAT GGCCGGAGTC
GACACTCTGG CCGATGCGGT GAAAGTCACC CTGGGACCTC GAGGTCGAAA CGTCGTTCTG
GAGAAATCGT GGGGGCCCCC CACCGTGACA AAGGACGGAG TGACGGTCGC CAAGGAAATC
GACCTCGAAG ACAAATTCGA GAACATGGGC GCGCAGATGG TCAAGGAGGT CGCCAGCAAG
ACTTCCGATG TGGCGGGTGA CGGCACGACC ACCGCCACCA TTCTGGCCCA GGCCATATAC
AGGGCGGGTT CGAAGCTGGT CAGCGCGGGT CACAATCCCA TGGCGCTCAA GAGAGGCATC
GAATTGGCGG TTGCGGCGGC GGTCCGGGAG CTCAGGAACA TGAGCAAGCC CACGAAGGAC
CAGAAAGAAA TCGCCCAGGT GGGGACCATC AGCGCGAACA ATGATGTCGC CATCGGCGAC
ATCATCGCCG AAGCCATGAA CAAGGTCGGC AAGGAAGGCG TGATCACCGT GGAAGAAGCC
AAGAGCATGG AGACCACCCT GGAAGTGGTG GAAGGCATGC AGTTCGACCG CGGTTACGTG
TCTCCGTACT TCGTCACGGA CCCCGAACGC ATGGAGGTCG TGCTCGAGGA TCCGTATATA
CTGATCAATG AAAAGAAGAT CAGCAACATG AAAGACCTTT TGCCCGTGCT CGAACAGATC
GCGAAGATGG GCGCCCCGCT GCTCATCGTT GCCGAAGACG TCGAGGGCGA AGCGTTGGCC
ACCCTGGTCG TGAACAAGCT GCGGGGCACG CTCAAGGTCA GCGCCGTGAA GGCTCCGGGA
TTCGGGGACC GACGCAAGGC CATGCTCGAA GACCTTGCGG TTCTCACCGG CGGCAAGGTC
GTCTCCGAGG ACATCGGCGT GAAGCTCGAA AACGTGTCGT TGCAGGATCT CGGTCGAGCC
AAGACCGTCC GGATCGACAA GGACAATACG ACGATCGTGG ACGGCGCGGG TGCCCGGAGC
GCCATCGAGG CCCGCGTGAA GCAGATTCGG GCACAGATCG ATGAAACCAC CTCCGATTAC
GACCGAGAGA AATTGCAGGA ACGGCTGGCC AAGATCGTCG GCGGGGTCGC CGTGGTGCGC
GTGGGTGCGG CCACCGAGAC CGAAATGAAG GAGAAGAAGG CGCGCGTGGA GGATGCCCTG
AACGCTACGC GGGCCGCCGT GGAGGAAGGC ATCGTGCCGG GTGGCGGCGT GGCTCTGCTG
CGCTGCCTGC CGGCGCTGGA AAAGTTGGAC CTGCACGGAG AGGATGCGTT CGGCGTCAAG
ATCGTCATGC GCGCTCTCGA AGAACCGGTT CGACAGATTG CGAACAACGC GGGCCATGAA
GGGTCCGTGG TGGTCCAGCA GGTGAAGCAG GGCACCGGGT CGCATGGTTT CAACGCGGAT
ACAGAGGTCT ACGAAGACCT TAGCGCCGCG GGGGTCATCG ATCCGACCAA GGTGGTGCGC
TTCGCTTTGC AGAACGCGGC CAGCGTGGCT TCCTTGCTGC TCACCACGGA AGCCATGATC
GCCGAAAAGC CGAAGAAGCA GAAACCTGCT CCGGCCATGC CGGGCGCCGG AATGGAAGAC
ATGTATTAG
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| Protein sequence | MAVKEIKYYA EAREKIMAGV DTLADAVKVT LGPRGRNVVL EKSWGPPTVT KDGVTVAKEI
DLEDKFENMG AQMVKEVASK TSDVAGDGTT TATILAQAIY RAGSKLVSAG HNPMALKRGI
ELAVAAAVRE LRNMSKPTKD QKEIAQVGTI SANNDVAIGD IIAEAMNKVG KEGVITVEEA
KSMETTLEVV EGMQFDRGYV SPYFVTDPER MEVVLEDPYI LINEKKISNM KDLLPVLEQI
AKMGAPLLIV AEDVEGEALA TLVVNKLRGT LKVSAVKAPG FGDRRKAMLE DLAVLTGGKV
VSEDIGVKLE NVSLQDLGRA KTVRIDKDNT TIVDGAGARS AIEARVKQIR AQIDETTSDY
DREKLQERLA KIVGGVAVVR VGAATETEMK EKKARVEDAL NATRAAVEEG IVPGGGVALL
RCLPALEKLD LHGEDAFGVK IVMRALEEPV RQIANNAGHE GSVVVQQVKQ GTGSHGFNAD
TEVYEDLSAA GVIDPTKVVR FALQNAASVA SLLLTTEAMI AEKPKKQKPA PAMPGAGMED
MY
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