Gene Sfum_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2323 
Symbol 
ID4459379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2854058 
End bp2855323 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content62% 
IMG OID639703088 
Producthypothetical protein 
Protein accessionYP_846439 
Protein GI116749752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000821276 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.699659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA GAAATATCCC ATGGTGTTCT GTCTTGGTAC TGTTTATTCT AGCGGCGTTG 
CCCGCCGGAG TGTGCGCCCA GGGCGGCGCT CCGCTTGCAA CCCCCCAGCA GATCGATCAA
ATGACGGCTC CCGTGGCCCT CTATCCCGAT TCCCTTCTGA GCCAGATTCT CATGGCGTCG
ACCTATCCGC TGGAGGTAGT GGAAGCGGAC CGGTGGAGCA AGGCCAACCA GGGTCTCAAG
GGCAAGCAGC TGGATGATGC CGTCGAACAG CAGGGCTGGG ATCCCAGCGT CAAATCGCTG
GTCTATTTTC CCCAAGTGCT GGATATGATG AGTCAGAAGC TGGATTGGAC CAGCAAGCTC
GGTGACACTT TCCTCGGCCA GGAACAGGAC GTGATGGATT CGATCCAGCG CCTGAGGAAA
CAGGCCAAGG CGCAGGGGAA CCTCAAGAGC ACCAAGGAAC AGAAGGTCGT CGTCCAACAG
GACGTCATCA GTGTCGAGCC CGCGGATCCC CAGGTGGTCT ACGTGCCCGT TTACAACCCG
ACCGTGGTGT ACGGCGCCTG GGCTTATCCG GCATATCCTC CGGCTGTTCT CTATCCGCCC
GGATACGTCG CGGCGCCCGG CTTCGTGAGC TTCACCGCCG GTTTTTTCGC GGGAGCGTAT
CTCTACGGCG GCTTCAACTG GGGCACCCAC AACGTCATCA TCAACAACAA CAATTTCTAT
AACAGGAACG TCTGGAACAA TCGGCGCGGT CCTTATCCGG GGCCTCCCCA CGGTCACTAC
TGGAACCATG ATCCCTATCA TCGGCAGAAT GTCCCATACA GGAACGCGAA TGCCTCGCAG
CGTTACAACC AGAGCCAGGC GAACGCCCGG CGTGATGCGG TCCGCACCAA TCCATCGACT
CTGAACAATC GCGGTTACGA CGCGGCGCGA TCCAATCAGC CCAAATCTGC CATGAACGTC
GACAAGGGGC AGAGTCGGCA GAATCAGGCG TTCGGCGGCC TCGACAACGG GCGAAAAGAC
CAGTTCGCCG GTCAGCGCGG GCAGGCCAGC CGCAACAGCC CCACCTATCA GCGCCAGGTT
CTGCAGCAGC CTTCAGGAGG TCAGGGGAGC CGCGGCGGAT TCGGTGGCCA GAGCTTCCAG
GGTGGCGGAG CGGGTGGCCA GGGCGCCCGT GGCGGCGCCG GTGGCGGCCA GAGCATCCAT
GGCGGCGGTG GCATGGGCGG CGGCGGTTTG CACGGAGGAG GCGGCGGAGG CGGTCGGCGA
CGATAG
 
Protein sequence
MKRRNIPWCS VLVLFILAAL PAGVCAQGGA PLATPQQIDQ MTAPVALYPD SLLSQILMAS 
TYPLEVVEAD RWSKANQGLK GKQLDDAVEQ QGWDPSVKSL VYFPQVLDMM SQKLDWTSKL
GDTFLGQEQD VMDSIQRLRK QAKAQGNLKS TKEQKVVVQQ DVISVEPADP QVVYVPVYNP
TVVYGAWAYP AYPPAVLYPP GYVAAPGFVS FTAGFFAGAY LYGGFNWGTH NVIINNNNFY
NRNVWNNRRG PYPGPPHGHY WNHDPYHRQN VPYRNANASQ RYNQSQANAR RDAVRTNPST
LNNRGYDAAR SNQPKSAMNV DKGQSRQNQA FGGLDNGRKD QFAGQRGQAS RNSPTYQRQV
LQQPSGGQGS RGGFGGQSFQ GGGAGGQGAR GGAGGGQSIH GGGGMGGGGL HGGGGGGGRR
R