Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2313 |
Symbol | |
ID | 4459404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2842643 |
End bp | 2843353 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639703079 |
Product | ABC transporter related |
Protein accession | YP_846430 |
Protein GI | 116749743 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAATC TCAAGCTGAA GAACGTCCAT ACTTTTTTTG GAACGAGCCA CATCCTGTTC GGAATCAGCC TCGAAGTGAA GCGGGGCGAG TGCGTGTGCC TGCTGGGCCG AAACGGAGTC GGCAAGACCA CGACCTTGAA AACCATCATG GGACTTGCCC GGCCCAGCGA CGGGGAAATC ACTTTCAACG GGAAAAGCCT CGTTGGACTG CCCCCGTATG AAATCGCCGG GATGGGGGTC GGATATGTCC CGGAGGACAG GATCGTTTTC CCGGACTTGA CGGTGCTGGA AAACCTCGAG GTGGCCGCCA AGCCGCCCCT GACCGACGAC ATACCTCCGT GGGATGTTCC GGCGATTTTC GGGCTTTTTC CTTCTTTGAA GCCGTTGGAA AACCGCCCCG CCGGCTACTT GAGCGGAGGG GAGCAGCAGA TGCTCACCAT CGGCCGCACC CTGATGGGAA ATCCTCAGAT GATGCTGCTC GATGAGCCCG TGGAAGGTCT CGCGCCCGTC GTGGTTCACG AAATAGTTCG TCAGCTCAAA CACCTGAAAG AACTGGGCCT CACCATTCTC TTCACCGAGC AGAACATACG GTTTGCGACC GAGATTTCCG ACCGGGCGTA CATCATTGAA AGTGGTCTGG GAAGATACGA GGGGACCATG GCCGACCTCG AACGGCAACC GGACATAAAG AAGAAATATC TCATGATATA A
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Protein sequence | MGNLKLKNVH TFFGTSHILF GISLEVKRGE CVCLLGRNGV GKTTTLKTIM GLARPSDGEI TFNGKSLVGL PPYEIAGMGV GYVPEDRIVF PDLTVLENLE VAAKPPLTDD IPPWDVPAIF GLFPSLKPLE NRPAGYLSGG EQQMLTIGRT LMGNPQMMLL DEPVEGLAPV VVHEIVRQLK HLKELGLTIL FTEQNIRFAT EISDRAYIIE SGLGRYEGTM ADLERQPDIK KKYLMI
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