Gene Sfum_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2313 
Symbol 
ID4459404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2842643 
End bp2843353 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content56% 
IMG OID639703079 
ProductABC transporter related 
Protein accessionYP_846430 
Protein GI116749743 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATC TCAAGCTGAA GAACGTCCAT ACTTTTTTTG GAACGAGCCA CATCCTGTTC 
GGAATCAGCC TCGAAGTGAA GCGGGGCGAG TGCGTGTGCC TGCTGGGCCG AAACGGAGTC
GGCAAGACCA CGACCTTGAA AACCATCATG GGACTTGCCC GGCCCAGCGA CGGGGAAATC
ACTTTCAACG GGAAAAGCCT CGTTGGACTG CCCCCGTATG AAATCGCCGG GATGGGGGTC
GGATATGTCC CGGAGGACAG GATCGTTTTC CCGGACTTGA CGGTGCTGGA AAACCTCGAG
GTGGCCGCCA AGCCGCCCCT GACCGACGAC ATACCTCCGT GGGATGTTCC GGCGATTTTC
GGGCTTTTTC CTTCTTTGAA GCCGTTGGAA AACCGCCCCG CCGGCTACTT GAGCGGAGGG
GAGCAGCAGA TGCTCACCAT CGGCCGCACC CTGATGGGAA ATCCTCAGAT GATGCTGCTC
GATGAGCCCG TGGAAGGTCT CGCGCCCGTC GTGGTTCACG AAATAGTTCG TCAGCTCAAA
CACCTGAAAG AACTGGGCCT CACCATTCTC TTCACCGAGC AGAACATACG GTTTGCGACC
GAGATTTCCG ACCGGGCGTA CATCATTGAA AGTGGTCTGG GAAGATACGA GGGGACCATG
GCCGACCTCG AACGGCAACC GGACATAAAG AAGAAATATC TCATGATATA A
 
Protein sequence
MGNLKLKNVH TFFGTSHILF GISLEVKRGE CVCLLGRNGV GKTTTLKTIM GLARPSDGEI 
TFNGKSLVGL PPYEIAGMGV GYVPEDRIVF PDLTVLENLE VAAKPPLTDD IPPWDVPAIF
GLFPSLKPLE NRPAGYLSGG EQQMLTIGRT LMGNPQMMLL DEPVEGLAPV VVHEIVRQLK
HLKELGLTIL FTEQNIRFAT EISDRAYIIE SGLGRYEGTM ADLERQPDIK KKYLMI