Gene Sfum_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2302 
Symbol 
ID4459393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2827187 
End bp2829010 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content59% 
IMG OID639703068 
Productsuperfamily I DNA/RNA helicase-like protein 
Protein accessionYP_846419 
Protein GI116749732 
COG category[R] General function prediction only 
COG ID[COG3972] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAA TGATTCCGCA CGACATCGAC GAATTCACCA CGGAAGGCGA ACGCAAGTTT 
TACAGTTTCC TGGAAACGTT CGCAAAGCCG GACCGTGAGT TCACCACGTG GTATCTCCCC
GACATCGCCG GGAAAGAACC GGATTTCATC CTCTACTGCG AGGAGATCGG CCTGATCGTC
TTTGAGGTCA AGGACTGGGA GCTGAGCCAG ATTCTGGAAG CGAACCCGTC CAGCTTCAAA
CTGCGCATGG GCAAGGCCAC CAAGAGCCTG AAGAGTCCTC TTCACCAGGC TCGCGAGTAT
CTCAACTCCC TCAAGGACAG GCTGAAAGCC GACGGCAGGC TGTTGTCGAC GGATGCGGCA
CATTACGGCA ACCCCAAGGT CCCGATCGAC TACGGGGTGG TTTTCCCGAA CATCCGCAAG
GACGAATACT GCCGGCGTGG ACTGGACAGG GTGATCAACC TCAACCGCGT CTTTCTTTGG
GACGACCTGC ACGCGAGCTC GGAAATCTGC CTGGACGGCA GCGGCAGGTG TTTCCGCAGG
AAGCTCCGGG ACATGTTTCC GCCCAGGTTC CGCTTCAGCA TCACCCGGGC GGAATACAAT
CACCTGAAGC ATCTGCTTTT CCCCGTGGTC CGCATCACTC AACCGGAACG GGATGCGTGC
GCCTATGTGG ATCCTTCCAG GCGGTTGAAT GTGCTCGACG ACCGCCAGGA AGCCCTCGCA
CGGAGGTTCG CTCCGGGCCG GCACATCATC ACGGGACCCC CGGGAAGCGG GAAGACCCTC
ATCCTGGTTC ACAAGGCGGT GTTCCTGAGG CTCTACAGGC AGGACGTCAA GAACATGCTC
TTCGTCTGCC ACAACGCTTC TCTCGTCAAT TACGTCAAGC GGCTGCTTTC GGAGAAGAAA
GCGGGGTTCG GACCGGGCGG GGTCGAGGTC TGCCATTTCT TCGAGCTTTG TTCGAAGATC
CTCGGGGAAG AAATTCGCTT CGACAGTGCG GACAAGAGCT ATTACGAGCT TGTGGTCGAG
GAGACCCTTG CGCGCCAGCG GACCGAAGGA GTGAAGTACG ATGCCGTTCT GGTCGACGAA
GGCCAGGATT TCACCCCGGC TATGGGCAAG GTGATCGTCA ATCTGCTCGA TCCCGACTCG
AATGATCTGA CCGTGGCCCT CGATGAAGGA CAAAGCCTGT ACGGCGAGGG CGCGTTCTGG
GATGTTCCGG AAAACGGGAC AAAGGTCCGC ATCGATCGGG TCGGTTCATC CTACCGTTTC
ACCAGCGAAA TAAGGCAGTT TGCGTTCGGC TTCATGAAGT ATGAGAATGC CGGCGAATCG
GCGCTCCCGC CCGAATGCGC GGTTCATGGG CCAAAACCCG TCATGACCCG GATGGGGGAC
ATCGGAGAGC TGGTTTTTCA CGTGGCGGAC ATGATCAAGG CATTGCACGC CTGTGGGGAA
TATCCCCTGT CGGAAATGGC CGTTCTCTAT TCCGTGCGGT TCACCCGGGA TGCGAAAGGA
GAGCGGGTTT CATTGCCCGA GCTGCTCATC GGGGCGCTGG AATCCAGGGG CATCATCGCC
GACTGGACCA CGGAAAACTA CAGCGCCAGG CGTTCCTACG ACATTTCGAC CGACAGGGTA
TGCGTATCGG CCATCCACGG TGCCCGGGGC CTCGACTGGG CCTGCGTTTT TCTGCTCGGT
CTGGACGAAC TGGCACCGGA CATCGGGCTG ACGGATCGCG CCCGGCGATA CGCCTTCGTG
GGGATGACGA GAGCGCGCCA CAGGCTGTGC ATCCCTTATG TCCGCAGGAA CTCGCTGATC
AGGAACATGT CGACCTGTCT TTAG
 
Protein sequence
MATMIPHDID EFTTEGERKF YSFLETFAKP DREFTTWYLP DIAGKEPDFI LYCEEIGLIV 
FEVKDWELSQ ILEANPSSFK LRMGKATKSL KSPLHQAREY LNSLKDRLKA DGRLLSTDAA
HYGNPKVPID YGVVFPNIRK DEYCRRGLDR VINLNRVFLW DDLHASSEIC LDGSGRCFRR
KLRDMFPPRF RFSITRAEYN HLKHLLFPVV RITQPERDAC AYVDPSRRLN VLDDRQEALA
RRFAPGRHII TGPPGSGKTL ILVHKAVFLR LYRQDVKNML FVCHNASLVN YVKRLLSEKK
AGFGPGGVEV CHFFELCSKI LGEEIRFDSA DKSYYELVVE ETLARQRTEG VKYDAVLVDE
GQDFTPAMGK VIVNLLDPDS NDLTVALDEG QSLYGEGAFW DVPENGTKVR IDRVGSSYRF
TSEIRQFAFG FMKYENAGES ALPPECAVHG PKPVMTRMGD IGELVFHVAD MIKALHACGE
YPLSEMAVLY SVRFTRDAKG ERVSLPELLI GALESRGIIA DWTTENYSAR RSYDISTDRV
CVSAIHGARG LDWACVFLLG LDELAPDIGL TDRARRYAFV GMTRARHRLC IPYVRRNSLI
RNMSTCL