Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2302 |
Symbol | |
ID | 4459393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2827187 |
End bp | 2829010 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703068 |
Product | superfamily I DNA/RNA helicase-like protein |
Protein accession | YP_846419 |
Protein GI | 116749732 |
COG category | [R] General function prediction only |
COG ID | [COG3972] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAA TGATTCCGCA CGACATCGAC GAATTCACCA CGGAAGGCGA ACGCAAGTTT TACAGTTTCC TGGAAACGTT CGCAAAGCCG GACCGTGAGT TCACCACGTG GTATCTCCCC GACATCGCCG GGAAAGAACC GGATTTCATC CTCTACTGCG AGGAGATCGG CCTGATCGTC TTTGAGGTCA AGGACTGGGA GCTGAGCCAG ATTCTGGAAG CGAACCCGTC CAGCTTCAAA CTGCGCATGG GCAAGGCCAC CAAGAGCCTG AAGAGTCCTC TTCACCAGGC TCGCGAGTAT CTCAACTCCC TCAAGGACAG GCTGAAAGCC GACGGCAGGC TGTTGTCGAC GGATGCGGCA CATTACGGCA ACCCCAAGGT CCCGATCGAC TACGGGGTGG TTTTCCCGAA CATCCGCAAG GACGAATACT GCCGGCGTGG ACTGGACAGG GTGATCAACC TCAACCGCGT CTTTCTTTGG GACGACCTGC ACGCGAGCTC GGAAATCTGC CTGGACGGCA GCGGCAGGTG TTTCCGCAGG AAGCTCCGGG ACATGTTTCC GCCCAGGTTC CGCTTCAGCA TCACCCGGGC GGAATACAAT CACCTGAAGC ATCTGCTTTT CCCCGTGGTC CGCATCACTC AACCGGAACG GGATGCGTGC GCCTATGTGG ATCCTTCCAG GCGGTTGAAT GTGCTCGACG ACCGCCAGGA AGCCCTCGCA CGGAGGTTCG CTCCGGGCCG GCACATCATC ACGGGACCCC CGGGAAGCGG GAAGACCCTC ATCCTGGTTC ACAAGGCGGT GTTCCTGAGG CTCTACAGGC AGGACGTCAA GAACATGCTC TTCGTCTGCC ACAACGCTTC TCTCGTCAAT TACGTCAAGC GGCTGCTTTC GGAGAAGAAA GCGGGGTTCG GACCGGGCGG GGTCGAGGTC TGCCATTTCT TCGAGCTTTG TTCGAAGATC CTCGGGGAAG AAATTCGCTT CGACAGTGCG GACAAGAGCT ATTACGAGCT TGTGGTCGAG GAGACCCTTG CGCGCCAGCG GACCGAAGGA GTGAAGTACG ATGCCGTTCT GGTCGACGAA GGCCAGGATT TCACCCCGGC TATGGGCAAG GTGATCGTCA ATCTGCTCGA TCCCGACTCG AATGATCTGA CCGTGGCCCT CGATGAAGGA CAAAGCCTGT ACGGCGAGGG CGCGTTCTGG GATGTTCCGG AAAACGGGAC AAAGGTCCGC ATCGATCGGG TCGGTTCATC CTACCGTTTC ACCAGCGAAA TAAGGCAGTT TGCGTTCGGC TTCATGAAGT ATGAGAATGC CGGCGAATCG GCGCTCCCGC CCGAATGCGC GGTTCATGGG CCAAAACCCG TCATGACCCG GATGGGGGAC ATCGGAGAGC TGGTTTTTCA CGTGGCGGAC ATGATCAAGG CATTGCACGC CTGTGGGGAA TATCCCCTGT CGGAAATGGC CGTTCTCTAT TCCGTGCGGT TCACCCGGGA TGCGAAAGGA GAGCGGGTTT CATTGCCCGA GCTGCTCATC GGGGCGCTGG AATCCAGGGG CATCATCGCC GACTGGACCA CGGAAAACTA CAGCGCCAGG CGTTCCTACG ACATTTCGAC CGACAGGGTA TGCGTATCGG CCATCCACGG TGCCCGGGGC CTCGACTGGG CCTGCGTTTT TCTGCTCGGT CTGGACGAAC TGGCACCGGA CATCGGGCTG ACGGATCGCG CCCGGCGATA CGCCTTCGTG GGGATGACGA GAGCGCGCCA CAGGCTGTGC ATCCCTTATG TCCGCAGGAA CTCGCTGATC AGGAACATGT CGACCTGTCT TTAG
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Protein sequence | MATMIPHDID EFTTEGERKF YSFLETFAKP DREFTTWYLP DIAGKEPDFI LYCEEIGLIV FEVKDWELSQ ILEANPSSFK LRMGKATKSL KSPLHQAREY LNSLKDRLKA DGRLLSTDAA HYGNPKVPID YGVVFPNIRK DEYCRRGLDR VINLNRVFLW DDLHASSEIC LDGSGRCFRR KLRDMFPPRF RFSITRAEYN HLKHLLFPVV RITQPERDAC AYVDPSRRLN VLDDRQEALA RRFAPGRHII TGPPGSGKTL ILVHKAVFLR LYRQDVKNML FVCHNASLVN YVKRLLSEKK AGFGPGGVEV CHFFELCSKI LGEEIRFDSA DKSYYELVVE ETLARQRTEG VKYDAVLVDE GQDFTPAMGK VIVNLLDPDS NDLTVALDEG QSLYGEGAFW DVPENGTKVR IDRVGSSYRF TSEIRQFAFG FMKYENAGES ALPPECAVHG PKPVMTRMGD IGELVFHVAD MIKALHACGE YPLSEMAVLY SVRFTRDAKG ERVSLPELLI GALESRGIIA DWTTENYSAR RSYDISTDRV CVSAIHGARG LDWACVFLLG LDELAPDIGL TDRARRYAFV GMTRARHRLC IPYVRRNSLI RNMSTCL
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