Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2298 |
Symbol | |
ID | 4459389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2821632 |
End bp | 2823344 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639703064 |
Product | TPR repeat-containing protein |
Protein accession | YP_846415 |
Protein GI | 116749728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCGC AGCGAAGCCG ATTTCCTGCC TCACTGTGGC ACGAACCGGC TCTCCATCTT TCGGTCGTTG CTCTGACCGC CTTTCTATCC TATTCCAATA CCTTCGACGC ATCGTTTCAT TTCGACGATG TGAGAAACAT CGTTTCCAAT TCCATCATCC GGGATTTCGG CAACTTCATC GAACCGTCAC GGGTTGCGGA TCACCCGTAT TACTTCGACT TCAAGATGAG ATACGTCGGT TTTCTCACCT TTGCGTTGAA CCATGGTCTT CATGGATTGA AACTTGCGGG ATTTCACGCG GTGAACCTAC TGATCCATGT CGTCAACGGT TTTCTCGTCT ACTTTCTCGT GCTCCTGACT TTCAGGACCC CCGGGATGCG TTCCACGGTC ATGGGCGGCG AGCGACACGA CGACGCCCAA ACCGGCCCAC GCCGCCTCAT CGCGTTCTTT GCCGCCCTCT TTTTTGTCTC GCACCCGATT CAGACACAGG CCGTGACCTA TGTCGTGCAA AGATTCGCTT CCCTGGCCAC TTCGTTCTAC CTGGCAGCGG TTGTGTCATA TGCCGGGAGT CGCCTCAACG CAATGCATCG TCGCCCCGTC GCGGCCTGTT GTCTTTATGG GCTGGCGCTG TCTTCGACCG TCCTTGCCAT GAAGACCAAG GAGATATCCT TCACCATTCC AATCATCGTG GCGCTCTATG AATACCTGTT CTTCGGCAAG ACTTCAGGCA GCCGGGCCGC AAGATTGGCG CGGCTCGTCC CCTTCATCCT GACCTTCGCC GTGATACCGC TCGGCGCGGT CGATTTCGAC GGCGATGCAT CCGTCCTGAG TCAGTTGGGC GACCGTTCGA GAGTGCTGAC CGGCATGTCC AGGCACGACT ATTTTCTGAC TCAGCTCACC GTAATCCCGG TCTATATCGG CTTGATCTTT CTCCCTCTCG ACCAGAACCT CGACTACGAT CATCCGATCC ACACGGTGTT TTTGAATTCG CAAGTCGTGT ACTCCACCCT GCTGATTCTC TTCGTGCTGT TCGTCGGGGC CTTCCTGGCG AGTCGCTCGC GCTCCGGTGC GGGAGGATGG AGGCTGACCG CGTTCGGGAT TTTCTGGTTT CTTGTGGCTC TGTTGCCTGA GTCCAGCATT GTGCCGATCG TTGACGTGAT CTACGAGCAC CGGGTGTACC TGCCGTCGGT GGGGGCGTTT GTGGCCATTT CGTCCGGGGT CGTTCTGTTG GCCGAGAAAT ACCGGGCGGG ACAACCATGG GCAATGCGGG CGGTGTGTTT GTTGCTTGGC GTGGCGGTAC TTCTTTTTTC TGCGATGACG CACGCAAGGA ATGCCGTCTG GAAGGATGAG ATCACCTTGT GGGAGGACGT CGTCTCAAAG AGCGGGAACA AGGACAGGGC CCGAAACACC CTGGGGGCCG TCTACCTGGA GTCGGGCCGG CTCGATCGGG CGGAAGCCGA GCTCTTGAAG ACCCTCGAGA TAAACCCACG GTACTGGGCC GCGCACGTCA ATCTGGGCAG TTGCTACATG AGGAGGGCCG AATCGGCGCG GCGCGAGGGC GGTTCATCCG AGCGGGTGCT GGAGTTGGTC GACAGGGCGA TTGCCTCCTA TCGGCATGCC CTGACGATCG ACCCCGGCAA TGAAATGATC GATTCGTTGA TCGAATCGGC TTACCGGACC CGGCATGTTC TGACGACGAA TGCTGAGAGG TGA
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Protein sequence | MIPQRSRFPA SLWHEPALHL SVVALTAFLS YSNTFDASFH FDDVRNIVSN SIIRDFGNFI EPSRVADHPY YFDFKMRYVG FLTFALNHGL HGLKLAGFHA VNLLIHVVNG FLVYFLVLLT FRTPGMRSTV MGGERHDDAQ TGPRRLIAFF AALFFVSHPI QTQAVTYVVQ RFASLATSFY LAAVVSYAGS RLNAMHRRPV AACCLYGLAL SSTVLAMKTK EISFTIPIIV ALYEYLFFGK TSGSRAARLA RLVPFILTFA VIPLGAVDFD GDASVLSQLG DRSRVLTGMS RHDYFLTQLT VIPVYIGLIF LPLDQNLDYD HPIHTVFLNS QVVYSTLLIL FVLFVGAFLA SRSRSGAGGW RLTAFGIFWF LVALLPESSI VPIVDVIYEH RVYLPSVGAF VAISSGVVLL AEKYRAGQPW AMRAVCLLLG VAVLLFSAMT HARNAVWKDE ITLWEDVVSK SGNKDRARNT LGAVYLESGR LDRAEAELLK TLEINPRYWA AHVNLGSCYM RRAESARREG GSSERVLELV DRAIASYRHA LTIDPGNEMI DSLIESAYRT RHVLTTNAER
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