Gene Sfum_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2294 
Symbol 
ID4459420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2818891 
End bp2820357 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content59% 
IMG OID639703060 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_846411 
Protein GI116749724 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTAA GAATTTTCTG GCGCGTGATT TTCGCCCAGG GCGTACTGAT CCTACTCGTC 
CTCGTGGTGA GCCTGTACGC CCTCGACAAG CTCAACTGGC TCATCCGGCT CAACGGACGC
ATTGTCGAGG TGGATACCGT GTGCCTGAAG GAACAGAGGC GGCTCTTGAA GACCTTTCTG
GTGGAGATGC GCAATGCGGA AAAATACATG CTGATTCAGG ACCCGGTTCT CCACGGAGCC
TATATCGAGG CGAGGCAGGA CTTCGCTGAA GCCCTGGCCA GGATCAACGC CTTGGTCGAT
TCCGAGCCGG AACGGAGTCT GATCGCGGAA ATCAAGGACC TACACACCCG CTACGACGAG
GAGTTCAAGC GGGCCGTGCC CGGGAAGGGT ACCGAGGACC AGACCAGAAA AGGAATCGCC
GAGGGGTTGC TCGAACGCGG CAATGAGCTC GTTCGCCACC GTGAAGAACT CATCGGCGCC
AAGACCGTGG AAGCCCGCGA CATGGCGGAA TCCGCCGCCC GAGACATGGG CTGGCTGACG
GTTGCCGGCA TAGGAGGCGC CCTCATGCTC GCTTTTTTCC ATGCGCGCGG GATGAGCAGG
CCTCTGAAAA ACCTGGCCCA GGAAATGCGC AGAGTGGGCC GGGGGGAGTT CACCCGCTCC
CTCGACCTGA GGGCGCCTCT GGAAGTCGTG GAGCTTGCCG AGACCTTCAA CTGGATGACG
GAACAACTGG CCCGCCTCGA AGAGCTCAAG GCGGACTTCA CCGCTCATGT CTCGCATGAG
CTGCGCACTC CCCTCACCGC CATCCGCGAA GGAATCGCCC TCCTGCTGGA GGAAATCCCC
GGACCGCTCT CGTCTTCACA GAAGGAAATC CTGGAGGTCG TGCGCGGCAA CGGCGAACGG
CTTTTTGTGA GCATCTCCTC CATCCTGGAT CTTTCCCGGA TGGAAGGTGA AATGATGGAA
TACCAGTACG CGCCGTGTGA CCTTCAGACC CTCATAGAGA AAAGCGTTCA AGGGCTGGAC
CCCATTGCGA GGAAGAAAAA CATCGGGGTC GAGACCATCC GAACCGGGAA TCTGCCGCTC
CTCATGCTCG ATGAATCCAG GATGCGGCAG GTCATTGACA ATCTCATGAG CAATGCGCTG
AAATTCACCC CCGAGGGGGG CCGTATTTCC ATAACCACCG TCCTGAAAAG AGATGACCGG
GAGAAAGGGA GGGTGGTGGA GGTGAGAGTT TCGGACACGG GGCATGGAAT TCCGGAAGAA
GATGTCGAAA AGGTGTTCGG GCGCTTCTAC CGGAGTCCGC ACCATCGAGG CAAACGGCAC
CAGGGAACCG GATTGGGCCT GGCAATCGCC CGCCATATCG TCACTGCCCA TGGAGGGCGA
ATCTGGGCGG AGAACGAGCC TGCAAGCGGT GCAACCATAG TGTTTACTCT TCCCGCAAAT
TTTGCTTACA ATAGATCGTC GGTTTGA
 
Protein sequence
MRLRIFWRVI FAQGVLILLV LVVSLYALDK LNWLIRLNGR IVEVDTVCLK EQRRLLKTFL 
VEMRNAEKYM LIQDPVLHGA YIEARQDFAE ALARINALVD SEPERSLIAE IKDLHTRYDE
EFKRAVPGKG TEDQTRKGIA EGLLERGNEL VRHREELIGA KTVEARDMAE SAARDMGWLT
VAGIGGALML AFFHARGMSR PLKNLAQEMR RVGRGEFTRS LDLRAPLEVV ELAETFNWMT
EQLARLEELK ADFTAHVSHE LRTPLTAIRE GIALLLEEIP GPLSSSQKEI LEVVRGNGER
LFVSISSILD LSRMEGEMME YQYAPCDLQT LIEKSVQGLD PIARKKNIGV ETIRTGNLPL
LMLDESRMRQ VIDNLMSNAL KFTPEGGRIS ITTVLKRDDR EKGRVVEVRV SDTGHGIPEE
DVEKVFGRFY RSPHHRGKRH QGTGLGLAIA RHIVTAHGGR IWAENEPASG ATIVFTLPAN
FAYNRSSV