Gene Sfum_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2282 
Symbol 
ID4459408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2803501 
End bp2804220 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content64% 
IMG OID639703048 
ProductABC transporter related 
Protein accessionYP_846399 
Protein GI116749712 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGTTGT TGGAGGGGCA TGGGCTGACC AGGCGATTCG GGGGCGTGAC GGCGCTCGAC 
GCCGTGAGCT TCACCGTGGA AGAGGGAACC ATCGTGGGGT TGATCGGGCC CAACGGGGCC
GGCAAGACCA CGCTTTTCAA CCTCGTTGCG GGAGCGCTGA AACCCGGTGC GGGGAGGATC
CTTTTCGAGG GGCAGGACAT AACCGGGAGG CCGGCCAACG AGCTGTGCCG CAGGGGCATT
GCCAGGACTT TCCAGGTGAC GCGCCCGTTC GCCGCCATGA CCTGCCTGGA AAACGTCGGA
GTGGCCCTGG TCAACGGGCC CGCCCCTCAA GGTCGCGCCC TGTGGCGCCA GACCGCCCCA
CGCTACCTGG AAATGGTGGG CATGGGGGGC CTCGCCGATA CCCCGGCCGG GAGTTTGAAC
GTGATTCAGA AGAAACGGCT GGAGATCGCC CGGTCCCTGG CCACCCGGCC GAAGCTGCTC
ATGCTGGACG AAGTGCTGGG GGGCCTCAAC TCCCAGGAAA TCGTCCAGGC CGTCGATTTC
ATTCGCAAGC TGCGCGACGA GCACCATTTG ACCGTGTTCT GGATCGAGCA CGTCATGGGG
GCGATCATGA GGGCGGCGGA GAAGGTGATC GTCCTGGACC AGGGCAGGCA CTTGATGAAA
GGAACCCCCG AGGAGGTCGT CAGGGATTCG AGGGTCATTC AGGCCTATCT GGGAGAATAA
 
Protein sequence
MALLEGHGLT RRFGGVTALD AVSFTVEEGT IVGLIGPNGA GKTTLFNLVA GALKPGAGRI 
LFEGQDITGR PANELCRRGI ARTFQVTRPF AAMTCLENVG VALVNGPAPQ GRALWRQTAP
RYLEMVGMGG LADTPAGSLN VIQKKRLEIA RSLATRPKLL MLDEVLGGLN SQEIVQAVDF
IRKLRDEHHL TVFWIEHVMG AIMRAAEKVI VLDQGRHLMK GTPEEVVRDS RVIQAYLGE