Gene Sfum_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2281 
Symbol 
ID4459407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2802794 
End bp2803495 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID639703047 
ProductABC transporter related 
Protein accessionYP_846398 
Protein GI116749711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAG TATCGGCAAT CGACGTTTTT CGGGGGGAGA CCCAGGTGCT CTGGGAGGTC 
TCGTTCGACG TGCACCTGGG GGAACGCGTG GCCATTCTGG GCAGCAACGG CGCGGGGAAG
TCTTCATTGT TGGCCGCCAT TACGGGGGTC CTGCCCCCGC GACGGGGAGA AATCAGGTTC
AGGGGAGAGC CCTTGAGAGG CATGAAACCC CACCGCATCA TACAGTCGGG CGTGGCCCTC
GTGCCGGAAG GCCGCCGCGT GTACCGCGAG ATGACCGTGG CGGAGAACCT CGAAATGGGT
GCTTACCCCA AGCGGGGTCG GGCAGACATG CAGCGCACCA TGGAACACGT CATGCACATC
TTCCCGGCGC TCGAAAAACG CAGGGGCCAG GCGGCGGGGA CCCTGTCCGG CGGCGAACAG
CAGATGCTTG CCGTGGGACG GGCGCTCATG AGCCGGCCCG AACTGCTGTT GATCGATGAA
TTGTCCCTCG GCCTGGCGCC CCTGGTCACC AGGGAAATCT ACCGCGCGCT CGACCGGCTC
GTGGAAGAGA CCACCATCCT CCTGGTGGAA CAGAACGTGG AACAGGCCCT GCGACACTCG
CAACGGGCCT ACGTCATGGA AAGCGGCCGT ATGGTCCGCG AAGGGGTGTC GGCGGACCTT
ATGGAGGATG ACGGCATTCG ACGCGCCTAC CTGGGCATGT AG
 
Protein sequence
MLEVSAIDVF RGETQVLWEV SFDVHLGERV AILGSNGAGK SSLLAAITGV LPPRRGEIRF 
RGEPLRGMKP HRIIQSGVAL VPEGRRVYRE MTVAENLEMG AYPKRGRADM QRTMEHVMHI
FPALEKRRGQ AAGTLSGGEQ QMLAVGRALM SRPELLLIDE LSLGLAPLVT REIYRALDRL
VEETTILLVE QNVEQALRHS QRAYVMESGR MVREGVSADL MEDDGIRRAY LGM