| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2260 |
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| Symbol | |
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| ID | 4459456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2782133 |
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| End bp | 2783581 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639703026 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_846377 |
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| Protein GI | 116749690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATT CCCCTCCCAC AATACATAAG CGTTCCTCCC ACCGCATCAT CAGCAAGCTC
GCCTACCTGC TCAGCGCCAG GTGGGTCCGC GAGGCGCTGC AGGGCGTCTT TCTGATCGTT
CTGGCGCGAA TGAGCTCCAC GACGTACGGC GAGTTCATGC TCGCCCTGAA CGTCGGACAG
GTGCTCCTGT TCGTCGTGGA ATTCGGGCTG GACCAGCACC TGGTCCCGCA GCTGGCGCAA
AAGAAGAACC GCCAGGGCGA AGTCCTGATG CAGTTCACCA TGCTGAAGGT GATTCTCCTG
TTCGCGGGGA TGATTGGGAT GCTCCTGTTC GTCCACTGGC AGGGCTACGC GCCGTCCCTG
AGGATACTGG TCCTTGTGAT CGGCACGGGA GTTGGACTCG AAGCCGTTGC CAGTTCCTTT
TTTGTGGCCT GCCAGATGCA GGGCAGGCAG GATCTCGAAG GCAAATTGAA GTCGCTGGGC
GCCACGGCGG GCTTCGGATA CGGGATTGGG GCTCTTTATC TCGGGGCCCT GCCGTTGATC
GTGGCCTTCT TCAAACTGAT CGAAACCCTG GTCAACATGG CCGGATCGAT GCTGATCGTG
CTCAGGCAAT CCCGCCTCCG ATTTGCCGTG CCGGATTTGT GCAGCATTTA CGCCACCGGC
AGGGGCAGCT TGGTTTTTAC CCTGATGGCG GTCGCCACGA TCCTCTACGG CAAGGCCAAC
CTTTTCTTCC TCCAGAGCCA TGCGGGGGCG GAGGCCGTCG CTCAGTACGG CGTGACCTGG
CAACTCGTCG ACGGCATGTC GTCCATCACC TCCAACGTGC TCCTGCGCAA CATCCTCTAC
CCTCTTTTCG TCAACCTCTG GCAGTCGGAC CGGACGGAGC TCTCCGCCGT GGCCGAAAAC
GCCGCCCGGT GGCTGCTTGC CGTCGCCATG CCGCTCATGT TCGTGCTCTA CGTGGAGAGC
GACCGGATCA TCCCATTGTT GTACGGATCG GGCTACTCGG ATGCCGTCTG GATGCAGAAG
ATTTTGGTGC CGACCATCGG GATATCGTTC ATTCACAATC TTGCCGCCTA CCTCATGCTG
ACCTCCGGGC GGGAACGGCT TTTGCTGGGA TTCTACGTAG CCGGGCTCGT TTTCAACCTG
ATGCTGTGCC TCACGCTCAT CCCGGGATCG CCCCTGATGG GGACGGTGCT GGCCATCGTT
CTGACCAAAG GCGTCGTGGC CGTAATGACC GTGTACACAT GCCAGGTCAG CCTGCGAATC
CTGCAGCGGC GGTCCATGCT GCACCTGGGC GCGGCGCTGG TCCTGGGGGC CGCCGCGTAC
TGGCTTGCCG GGAAATTTGT GTTCCGGGAA CTGGCCGAAG CCTTGGCCGT CGTTCCGACG
CTGGTGCTCG GCTACCGCTG GTGGAAGGAG TTTTCGGGGC GGCCCCGGCC GGCGTCCGAA
GCGGCCTAG
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| Protein sequence | MTDSPPTIHK RSSHRIISKL AYLLSARWVR EALQGVFLIV LARMSSTTYG EFMLALNVGQ
VLLFVVEFGL DQHLVPQLAQ KKNRQGEVLM QFTMLKVILL FAGMIGMLLF VHWQGYAPSL
RILVLVIGTG VGLEAVASSF FVACQMQGRQ DLEGKLKSLG ATAGFGYGIG ALYLGALPLI
VAFFKLIETL VNMAGSMLIV LRQSRLRFAV PDLCSIYATG RGSLVFTLMA VATILYGKAN
LFFLQSHAGA EAVAQYGVTW QLVDGMSSIT SNVLLRNILY PLFVNLWQSD RTELSAVAEN
AARWLLAVAM PLMFVLYVES DRIIPLLYGS GYSDAVWMQK ILVPTIGISF IHNLAAYLML
TSGRERLLLG FYVAGLVFNL MLCLTLIPGS PLMGTVLAIV LTKGVVAVMT VYTCQVSLRI
LQRRSMLHLG AALVLGAAAY WLAGKFVFRE LAEALAVVPT LVLGYRWWKE FSGRPRPASE
AA
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