Gene Sfum_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2258 
Symbol 
ID4459454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2779801 
End bp2780883 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content47% 
IMG OID639703024 
ProductATPase central domain-containing protein 
Protein accessionYP_846375 
Protein GI116749688 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA ATATTCCAGA AAGTCTTTCA CCTGAAGAAT GCGCGAGCAA AATCTTCGAG 
TTGAGTGACG CAAGGTTTGA GCCCGCAATC GCACAGGATT TGTGGGGCAA GATCCTGCAG
CATAAGTGGC TCTTGTCAGA AAAAGTGGGT CGAGATGTGG GCTTTCGAAC TGCATGCATA
GATTTTCTTG AAAACATGGA ACAAGCGGTT GTCGAATACA CGAACTATAA ACGAAAAGAC
CTTCTCAAGG AAATGGGAGC CCAGACCATC GGTAGAGAGT TATGGGATGT AATTTCCGAT
TCACAACCCC CCAAACAGTT GGTTCAGCGG AGGATCATCC TCCCGCTTAC GGAAGAGGAT
CTGTCCAGAA AACACGGCGT GAGTCCTCCC AAGACCATCA TTTTCTTTGG GCCTCCGGGC
ACCGGAAAGA CTCATTTCGT CAAGGCGATA GCTGGAGTCC TTTCATGGTG GTACATTGAA
ATTGCACCCA GCATGCTTAT GGAGGACGGC ACGGAGAAGG TCGGCGCCAA CCTGCGGAGA
ATGATGGAGA AGGCACGACA GCTTGAAGAT GCTGTCATTT TCATCGATGA GTTTGAAGAA
TTGGCAGGGC ATCGAGATCG CGCAGATCGC CTCGATAAGT CCATCACTAA CGAATTTCTC
AAACAGGTTC CGCTGTTCAA GAACGAAGCG AACAAGGTGC TGCTGGTATG CGCCACCAAC
TTTATTCAAC ATCTCGATCC GGCGCTGCTT CGTCCGGGCA GATTCGACTG TATCATTCCT
GTTGGGGGAT TGAATGAAGA GGAGAGAAGA ACTATTTTAG AATACTACGT ATCACGGCTA
AATAGAGGAG AGATCGACCT GGATCTGATT GTGAAAGAGA CGTCCAGGTT TACACCGGCT
GATATTCAGT ACCTTTTTGA ACAGGGTGCT CAATTCGCAT TTGAACAGGA AATTGCCAGG
AAAGAAGATT ACAAAGTAAC CACAGAGACC ATTTTGCACA TGATGTCAAG AATGCATCCA
TCTCTGACGG ATGAAATCAT TAGCGAATTC GAGAGAGATA GTATTACCTA CGCACGAGTT
TAG
 
Protein sequence
MNENIPESLS PEECASKIFE LSDARFEPAI AQDLWGKILQ HKWLLSEKVG RDVGFRTACI 
DFLENMEQAV VEYTNYKRKD LLKEMGAQTI GRELWDVISD SQPPKQLVQR RIILPLTEED
LSRKHGVSPP KTIIFFGPPG TGKTHFVKAI AGVLSWWYIE IAPSMLMEDG TEKVGANLRR
MMEKARQLED AVIFIDEFEE LAGHRDRADR LDKSITNEFL KQVPLFKNEA NKVLLVCATN
FIQHLDPALL RPGRFDCIIP VGGLNEEERR TILEYYVSRL NRGEIDLDLI VKETSRFTPA
DIQYLFEQGA QFAFEQEIAR KEDYKVTTET ILHMMSRMHP SLTDEIISEF ERDSITYARV