| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2253 |
|---|
| Symbol | |
|---|
| ID | 4459449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2773010 |
|---|
| End bp | 2774251 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639703019 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_846370 |
|---|
| Protein GI | 116749683 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.790793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTCCC GCCCGATGCC CCCGAACGTC TCGCGGCAGC CCGCGGGCGA TGTGCCCGTC
AAGACGGTGT TCCTGCTCCA GGATCTGCTG TATGGAGGCA CGCAACGACA GGTCCTGGAC
CTGGCGCTCC ACCTGGACAG GACCCGTTTC GCGGTGGAGC TGTGGATGAT GCAGGCGGGA
GACGATCTGG TCCCCCTGGC CCGCGACCGC GGCATACCCC TGCGATGGCT TTCCCGGGCG
AGGTTCGCCG GCCCGCTGTG CCTTTTCCGC CTGTGGCGCC TGCTGCGCCG GGAGCGGGTG
GAACTGCTCG TGCTGTTCAC CGTCGTGCCG AACATCTGGG GAAGGCTGCT CGGAAGGCCG
GCGAAAGTGC CGGTGATCGT GGGTACCTGC CGGGGAGGCG GCTCTCCTCG CCGCCAGCAT
GAACGGTGGT TGTGGAACCG GGCGGACCAT CTCATCTGCA ACAGCCGTGA TTTGAAAGAT
GTCCTGCTGC GCAGCTGCCC GATGCCCGAC GCCATGGTGA GCGTCGTTCC GAACGGGGTG
GACCTCGAAT TGTTCCGCCC GCCGAACTTT CGGTCGCCGG ACGGCGAGGT CATTCTGTCC
ATTGCCCGGT TCGTCCCCGA CAAAGACCAG AAAACCCTCG TGGAGGCATT CGCCGCCATC
GCCGATCGTC ATCCGGGTGC CGAGCTCCGG CTGGTGGGGG ACGGCCCCCG CCTGGAACCG
GTCAGGCGGC ACGCCTTCGC GCTCCTGCCC GAAAGCCGCG TGGCCTTCCT GCCCGGACGC
CTGGATTTAC TCCCGCTCTT CCACCAGAGC AGCCTGTTCG TTCTCAGCTC CCTTCGGGAG
GGTCTCCCCA ACGTCATTCT CGAAGCCATG GCCACCGGAC TCCCCGTGGT TGCGACCCGC
GTGGGCGGCA TTCCGGAAGT GGTGGAGGAA GGCCGCACCG GCCTTCTGGT CCCCGCGGGA
GACGTCCGGG CCATGGCATC CGCGCTGGAC CGGCTGCTTT CGGATGAGAA CCTTCGGGAT
TCTTACGGCA AGGCGGGGAG AATGAAAGTG GAGACAAAAC ACCACTGCCG GACGGCGGCC
AGGCAGCACG AAGACATTTT CGAACGCCTG CTCCATGAGC GGGCTCCCGA TGGAACGGCC
ATCGCCCGTT CGCGTATGAA ACAGGGTTGC GGTCAAGAGG GGTGCATTGG GCGGGAGGGC
ACAAAGCCTT CCCCTACGTC TGACCGGCCT AACATCCCGT AA
|
|---|
| Protein sequence | MRSRPMPPNV SRQPAGDVPV KTVFLLQDLL YGGTQRQVLD LALHLDRTRF AVELWMMQAG
DDLVPLARDR GIPLRWLSRA RFAGPLCLFR LWRLLRRERV ELLVLFTVVP NIWGRLLGRP
AKVPVIVGTC RGGGSPRRQH ERWLWNRADH LICNSRDLKD VLLRSCPMPD AMVSVVPNGV
DLELFRPPNF RSPDGEVILS IARFVPDKDQ KTLVEAFAAI ADRHPGAELR LVGDGPRLEP
VRRHAFALLP ESRVAFLPGR LDLLPLFHQS SLFVLSSLRE GLPNVILEAM ATGLPVVATR
VGGIPEVVEE GRTGLLVPAG DVRAMASALD RLLSDENLRD SYGKAGRMKV ETKHHCRTAA
RQHEDIFERL LHERAPDGTA IARSRMKQGC GQEGCIGREG TKPSPTSDRP NIP
|
|---|
| |