| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2247 |
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| Symbol | |
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| ID | 4459443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2763203 |
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| End bp | 2765416 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639703013 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_846364 |
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| Protein GI | 116749677 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGC GAACGTTTCT GATCCTTGTC GCAATCCTGG TCCCCGTCGC TTTTATTGCC
GGCTGGTACG CAAGCCGGGG GAGCGGGGGT ACCGGGGGGG CCGGGGATCG GAAGCTCCTC
TACTACGTGG ACCCCATGAA TCCCTCTTTC CGTTCGCCGG AACCGGGGAC CGCGCCCTGC
GGGATGCCGC TCGAGCCCGT CTATGCCGGC GGGGCCACGC CGGGCGGGGT TGGGACAACC
CCTCCGGGGG CTGTGACGGT CCGCGCCGAC CGGTTGCAGC TCATCGGCGT GGCGCGCGAA
GCGGTCCGAT CCGGCACCCT GCGTCACACC CTGCGGCTGG TGGGGACCGT AGCTCCTGAT
GAGACGCGGC TCTTCCGGGT CACGGCGGCG ACCGCCGGGA GGATCCGCGA GATGGGCGCG
GCGACGACCG GGAGTCTCGT GAACAAGGGC GAAATCCTGG GCTCGTACTA CTCCGGTGAA
CTGCTCGTCC CCCAGCAGAA TTTTCTTCGC ATGTTCGAAA CCTATCAGAA CGTGCAGAAG
GGTGGCACGA ATCCTTACGA CAACTTCCAG GGCGGCGGCC AGCTCGCGAC CTACGTGCGG
AACGTGGACG TGGCTCGCCA GGCGCTCCTG AATCTGGGCA TGACCGCGGA ACAGGTGGAA
GAGGTTGCGG CAACACGCCA GCCCGCCTAT CTCGTGCAAA TCCGAGCCCC TGCCGCTGGG
ATCGTCACCT CGCGCAACGT CTCCCTCGGG CAGTCGTTCG ACGCGCGTGC GGACCTGTTC
ACGATCGCGG ATCTCAGCCT CGTCTGGGTG CTCGCCGACG CCTTTGAGGG GCAGGAGGAG
CACTTCAAGG CGGGCACACG GGCGATTGTG ATGCAACCCG GAGCGGGCCG CAGGTTCGCG
GCCGTGGTCA GCGGGGTCCC ACCCCGGTTT GAAGCCGCCA CCCGGACGCT CAAGGTTCGT
CTCGACGTCG TCAACCCCGG CCTCCTTCTT CGCCCCGACA TGCTGGTGGA CGTCGAGCTT
CCCGTCGAGA TCGGCCCCGG CCTTTTCGTT CCCAAGGGGG CTGTGATCGA CTCCGGAACG
CGCCGGATCG TCTTCGTGGA GCAGGGCGAG GGCGTGTTCG TGCCCCGCAC GGTCCGCGCG
GGGCGGCGGC TCGGCGAACG AGTCGAGATC GTCGGCGGCC TCATGGAGGG TGAGACGATC
GTTACCGCCG GGAACTTCCT TCTCGATTCC GAGAGCCGGA TGCGGGCTGC AGGGGCCGCT
GTGGCCGGCA TGGCACTCGA CCCCATCTGC GGCATGGAGG TGGATGAGAC CAGGGCGCGG
GCGAACGGGC TTGTGAGCGA ATATGGGGGA ACGACCTGGT TCTTCTGCGC GCCGGTCTGC
AAGCAGGAAT TCGACAGCGA TCCGAAGGCG GCGGCCGCCA AGGCCGAGGG CGTAAAGGAG
GTTGCGGCGC AGGAGCGGCA GCCCGCCAAC GGCATTGGGA CAAAGGCGTT CCACATGGAG
GACCCGGTCT GCGGCATGGA CGTGGACCCG GACGAAGCAA GCCGCGCCGG GCTCATCAGC
ACCTTCCAGG GAGCGCCCTT TGTCTTCTGC TCCCCGGAGT GCAAACAGGA GTTCGACAAG
GACCCCCGGG GCGTTCTTTC CCGTCCCGCC GGGGAGCGCT CCATGCCCCC CGCTGTTTCG
GCCCCTCACG AGGATGGGCA GCACGGGATG CCTCCGTCGA TGCAGGAGAA GACGCCACCT
CCGGCTCCGC AACCGGAGCA GATGCCCATG CGGGCACCCG CCCGCGGTGA CGATGAAAGC
CACGGAGCGG CGTCCGCGGA GCCCATGCGA ATGCAGGTCG ATCCGGTCTG CGGCATGCGG
GTCGACTCGC TGAAGGCCCG GGCAAAGGGG CTTGTGAGCG AATATGGGGG AAAGACCTGG
TTCTTCTGCG CGCGGGTCTG CAAGAAAGCG TTCGATCGCG ATCCACAGGC AGTGGCTGCC
AAGGCACAGG GGGTGAAGGA GTCCGCGGAG CAGGAGCGTC GGCTGCCAAA CGCTCACGAG
AGCATGGCGT CCCGGATGGA AGACCCGGTT TGCGGCATGG AAGTGGATCC GGTGGAGGCC
CGGGAGCAGG GTCTGCTGAG CGAGCACGCG GGAAAGACCT GGTTCTTCTG TGCGCCGGAG
TGCAAGCAGG CGTTCGACGC CGATCCGACG GTCTACCCGC AGGTGGTCCG ATGA
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| Protein sequence | MRQRTFLILV AILVPVAFIA GWYASRGSGG TGGAGDRKLL YYVDPMNPSF RSPEPGTAPC
GMPLEPVYAG GATPGGVGTT PPGAVTVRAD RLQLIGVARE AVRSGTLRHT LRLVGTVAPD
ETRLFRVTAA TAGRIREMGA ATTGSLVNKG EILGSYYSGE LLVPQQNFLR MFETYQNVQK
GGTNPYDNFQ GGGQLATYVR NVDVARQALL NLGMTAEQVE EVAATRQPAY LVQIRAPAAG
IVTSRNVSLG QSFDARADLF TIADLSLVWV LADAFEGQEE HFKAGTRAIV MQPGAGRRFA
AVVSGVPPRF EAATRTLKVR LDVVNPGLLL RPDMLVDVEL PVEIGPGLFV PKGAVIDSGT
RRIVFVEQGE GVFVPRTVRA GRRLGERVEI VGGLMEGETI VTAGNFLLDS ESRMRAAGAA
VAGMALDPIC GMEVDETRAR ANGLVSEYGG TTWFFCAPVC KQEFDSDPKA AAAKAEGVKE
VAAQERQPAN GIGTKAFHME DPVCGMDVDP DEASRAGLIS TFQGAPFVFC SPECKQEFDK
DPRGVLSRPA GERSMPPAVS APHEDGQHGM PPSMQEKTPP PAPQPEQMPM RAPARGDDES
HGAASAEPMR MQVDPVCGMR VDSLKARAKG LVSEYGGKTW FFCARVCKKA FDRDPQAVAA
KAQGVKESAE QERRLPNAHE SMASRMEDPV CGMEVDPVEA REQGLLSEHA GKTWFFCAPE
CKQAFDADPT VYPQVVR
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