| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2246 |
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| Symbol | |
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| ID | 4459442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2759904 |
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| End bp | 2763206 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639703012 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_846363 |
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| Protein GI | 116749676 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC GCATTGTCGA CTTTTCCGTG CGCAATAAGC TCGTCGTCTT CGCGGCGGTG
CTCGCCGCCG TGGTCGCCGG GTGGTGGTCC ATCGTGCGAA TGCCGCTCGA CGCCATCCCG
GACCTCTCCG ACACCCAGGT CATCGTTTAT TCCCGCTGGG ACCGCTCCCC CGACCTCGTG
GAGGACCAGG TCACCTATCC GATCGTGACC GCCATGCTCG GTGCCCCGGG GGTTCGGGCA
GTGCGCGGTT TCTCGGACTT CGGGTACTCT TTCGTCTACG TCATCTTCGA GGACGGCACC
GACCTCTACT GGGCGCGTTC ACGCACGCTC GAATACCTGT CCCCGGTCGT GCCGTCGCTC
CCGCCGGGGG TGAAGACCGA GCTCGGCCCC GATGCTCTGG GTCTCGGCTG GGTTTTCCAG
TACGCGCTGG TGGACGAGAC CGGCAAGCGC AGCCTCGCCG AATTGCGCTC GCTCCAGGAC
TGGTATCTGC GCTACCACCT CAAGGCCGTG CCGGGTGTGG CCGAGGTCGC CGCGGTGGGC
GGTTACCAGA AGCAGTACCA GGTGAATGTT GACCCCGCGC GCCTTCGTGC CTACGGCATC
CCGATCCAGC GGGTCACGGA GGCGGTGCGC GGCGGCAACG TCGAGACCGG GGCCCGTCTT
ATCGAGTTCG GCGGGACCGA ATACATGGTG CGGGGGCGTG GCTATGCCCG TACGATCGAG
GACTTCGAAG AGATCGTCGT ATCTTCGAGC GAGAACGGCT CGCCGATCCG GGTGCGCGAC
ATCGGGCAGG TCACGGTGGG ACCGGACCTG CGACGCGGCA TCGCCGAGCT CGACGGCCGA
GGGGAGGTTG TGTCGGGCAT CGTCGTGATG CGCCAGGGAC AGAACGCGCT CGAGGTGATC
GACCGCCTCA AGCGCAAGCT TGTCGAGATC GGACCGGGGC TTCCCGAGGG TGTGCGGCTG
CTGACCGCCT ACGACCGCTC CGATCTCATC CGCCGGGCAA TCCGGACGCT CACCACCGCC
ATCATCGAAG TCATCGTCAC GATCTCGGCC ATCATCATGC TCTTCCTCTG GCATCCCCCG
AGCGCGCTCA TCCCGGTGGT CACGATCCCG GTCGCGGTGC TGATCGCCTT CATACCCTTC
GGCGGACTCG GCCTGACCGC GAACATCATG TCGCTCGGCG GCATCGCGAT CGCCATCGGG
GCCCTCGATG ACGCGGCGAT CGTGGTCGTC GAGCAGGCCC ACAAGAAACT CGAGGCGTGG
GAGCGGGCGG GTCGGAAGGG CGACTACCGG CTCGTCATCC AGAAGGCGAT CACGCAGGTC
GCCGGTCCAA GCTTCTTTTC GCTGCTCGTG ATCGGGGTCT CCTTCCTTCC CATCCTCGCG
CTCGAAGCGC AGGAGGGGAG GCTTTTCAAA CCCCTCGCCT ACACGAAGAC CCTCTCCATG
TTCGTGGCGG CGGTCCTCGC GGTCACTCTC GATCCCGCGC TGCGAATGCT CCTGACCCGC
CCGCACCCCT TCGAATTCGG GCCGGCCTGG CTTCGCCGCA CTGCCAACGC CCTTCTCGTC
GGCACCGTCC GCCAGGAGGA GAGCCATCCG GTGAGCCGCG TCCTCATGCG GCTGTACGCT
CCCGTCGCAG CCTGGACCTT GCGGCGCAAG TGGCTCGTGA TCGCCGCCGC GATCCTGCTC
GTCGTCGCGA CGGTGCCGGC TTTCCTGAGG CTCGGCAGCG AATTCATGCC GCCGCTCGAG
GAAGGCTCGC TCTTCTACAT GCCGACCACG ATGCCCGGCA TCTCGATCAG CGAGGCCGGG
AGGCTTTTGC AGGTGACGGA CCGCATCATC GCTTCCTTTC CGGAGGTCGA CCGGGTCCTC
GGCAAGGCCG GGCGCGCCGG CACCTCCACC GACCCGGCGC CGCTTTCCAT GCTCGAGACC
GTCGTTACGC TCAAGCCCAA ATCCGACTGG CGAAAGATCG ACACGTGGTA TTCGTCGTGG
TCTCCGGAGT GGCTTACCCC GCTGCTGAGG CACATCACTC CCGACACCAT ATCCCAGGAG
CGCCTCATCG ACGAGATGAA CGACGCCTTA CGGATGCCTG GACTTTCGAA CGCCTGGACG
ATGCCGATCA AGGGGCGCAT CGATATGCTC GCGACCGGCA TCCGGACACC GGTCGGATTG
AAGATCTCCG GCTCCGACCT CGCGGAGATC GAACGCATCG GCGTGGCGAC CGAGGCCGTT
CTGAAGGGTG TGAAGGGCGC CCGGAGCGTG TTCGCCGAGC GCACCGCCGG GGGGTATTTC
CTCGATGTCG CCTGGAGGCG CCAGGAACTG GCGCGTTACG GGCTGAGCGT TCAGGAGGCG
CAGGACGTCC TTGCTGCCGC GGTCGGCGGG GAGAGCGTGA CGACCACCGT GGAGGGGCGG
GAGCGCTATA CGGTGAATGT TCGCTACCTG CCGGACTTTC GTGCTGACGA GGAGTCGCTC
GCGGCCGTCC TGGTGCCTGT CGGCGACGGT CGGGTCCAGG TGCCGCTCGG CCGGCTCGCC
GACGTCGTCG TGAAGACCGG TCCGGGCATG ATCCGCAATG AGGACGGCCT GCTCACCGGC
TACGTTTACG TGGACCTCGC AGGGCGCGAC CCGCAAAGCT TTGTGCGGGA GGCCGAGGCG
CTTCTGCGTG ACCGCGTGAA GCTGCCCCCC GGCAACGCCC TCGCGTGGAG CGGCCAATAC
GAGGCGATGG AGCGAGTCCG GGAGCGCCTG AAGGTCGTGA TTCCCTTCAC CCTCCTGCTC
ATCCTGCTCC TGCTTTACCT CAACACCCGA TCCGTGGTTA AGACCATGAT CGTGCTCCTC
GCGGTGCCGT TCTCGGCGGT CGGGGCCGTC TGGTTCCTGC ACCTGCTCGG CTACAACATG
AGCGTCGGCG TCTGGGTGGG GCTGATCGCG CTCCTGGGCG TCGACGCCGA AACCGGTGTC
TTCATGCTGT TGTACCTCGA TATTGCTTAC GAGCAGGCAA AAGCCGATGG GCGGCTGCGC
AATCTCGACG AGCTGCGGGC CGCAATCATG GAGGGGGCAG TCAAGCGCCT CAGGCCCAAG
TTCATGACGG TGACGACCAC CTTCATCGGT CTCGTGCCGA TCATGTGGGC CATCGGGGCA
GGGGCGGACA CCATGAAGCG CATTGCCGCA CCGATGATCG GGGGGATCCT CACCTCCTTC
CTCCTCGAAT TGCTCGTCTA CCCGGCGGTG TACGAGGTCT GGAAATGGCA CTTCGAGCTG
AAAAAGGGCG GGAGGGCCTC CGTGCCCGCG CCGCCCGCGA TATCCACCGA AGTCGGCACA
TGA
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| Protein sequence | MIDRIVDFSV RNKLVVFAAV LAAVVAGWWS IVRMPLDAIP DLSDTQVIVY SRWDRSPDLV
EDQVTYPIVT AMLGAPGVRA VRGFSDFGYS FVYVIFEDGT DLYWARSRTL EYLSPVVPSL
PPGVKTELGP DALGLGWVFQ YALVDETGKR SLAELRSLQD WYLRYHLKAV PGVAEVAAVG
GYQKQYQVNV DPARLRAYGI PIQRVTEAVR GGNVETGARL IEFGGTEYMV RGRGYARTIE
DFEEIVVSSS ENGSPIRVRD IGQVTVGPDL RRGIAELDGR GEVVSGIVVM RQGQNALEVI
DRLKRKLVEI GPGLPEGVRL LTAYDRSDLI RRAIRTLTTA IIEVIVTISA IIMLFLWHPP
SALIPVVTIP VAVLIAFIPF GGLGLTANIM SLGGIAIAIG ALDDAAIVVV EQAHKKLEAW
ERAGRKGDYR LVIQKAITQV AGPSFFSLLV IGVSFLPILA LEAQEGRLFK PLAYTKTLSM
FVAAVLAVTL DPALRMLLTR PHPFEFGPAW LRRTANALLV GTVRQEESHP VSRVLMRLYA
PVAAWTLRRK WLVIAAAILL VVATVPAFLR LGSEFMPPLE EGSLFYMPTT MPGISISEAG
RLLQVTDRII ASFPEVDRVL GKAGRAGTST DPAPLSMLET VVTLKPKSDW RKIDTWYSSW
SPEWLTPLLR HITPDTISQE RLIDEMNDAL RMPGLSNAWT MPIKGRIDML ATGIRTPVGL
KISGSDLAEI ERIGVATEAV LKGVKGARSV FAERTAGGYF LDVAWRRQEL ARYGLSVQEA
QDVLAAAVGG ESVTTTVEGR ERYTVNVRYL PDFRADEESL AAVLVPVGDG RVQVPLGRLA
DVVVKTGPGM IRNEDGLLTG YVYVDLAGRD PQSFVREAEA LLRDRVKLPP GNALAWSGQY
EAMERVRERL KVVIPFTLLL ILLLLYLNTR SVVKTMIVLL AVPFSAVGAV WFLHLLGYNM
SVGVWVGLIA LLGVDAETGV FMLLYLDIAY EQAKADGRLR NLDELRAAIM EGAVKRLRPK
FMTVTTTFIG LVPIMWAIGA GADTMKRIAA PMIGGILTSF LLELLVYPAV YEVWKWHFEL
KKGGRASVPA PPAISTEVGT
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