| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2239 |
|---|
| Symbol | |
|---|
| ID | 4459470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2751783 |
|---|
| End bp | 2753078 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639703005 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_846356 |
|---|
| Protein GI | 116749669 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCA GGCAGAAGAT ACGGATTGAC CGGATGTTCG GCGCTCCCGT CGCGTATATG
CTCAACGTCG CCGCGCGCGT GCTTGGCTGC GTACTGCGCC GGGACCACTC CTTCCCGGGC
AGGCCGGGAG TGATCTGCAT TGCGAAGTTC GTCGGCATGG GGAGCATACT GTCCGCCGGT
CCCATGCTCC AATCCATCCG GCGACGTTAC CCGGGCGCCC GGCTGGTCTT CATCAGCAGC
AGGAACAACG CTCCCCTGCT GCAAAGGATG ACGCTGGTTG ACGAATGCCT CTACATCTCC
GAAGCCTCGC TTCCGGCCAT CGCCGGTACG ACGCTGAAAG TCGTGTGGAA ATTGTGGCGG
TTGCGTCCCG CGCTGTACTT GGATCTTGAA TTGTATTCCT TCTACTCGAG CATCCTCGCC
ACGCTCAGTT GTGCCCGGAA CAGGGCCGGA TTCTATCGGA AGTCCACGGA ATTCAAGGAC
GGTCTGTTCA CCCACCTCAT TTTTTTCAAC ACCGGCATGC CGGTGGAGGC GCTGTACCTG
CAGATGTCCA TCGCGGCCGG GGCCGGCGCC GACCACGAGG CTCCGGAAGA CGTGTCCATT
GCGATCCTCG AAAAGGATCG GGATGAATTC TCGGTCTTCG CGAAAGGCTG GCTGGAACCC
GGCGACCGAT TGCTGGCGGT CAATCCCAAT GCGTCGGACC TTTGCCTGGA AAGGCGGTGG
CCGACGGCCT GCTTTGCCGA GACGATCAAG GCGCTGCTCG ATCGCATACC GTCTCTCAAG
GTGGTCCTGA CGGGAAGTCC TGGTGAAAGG GAGCACGTCG AAGGGCTTGC TTCGGTGTTT
GACGGGTATC AGGGACGCGT ACGAAACGCG GCGGGGAGAT TGTCCCTGGG GGGGTTCCTG
GCGTTGCTGA ACCGGGCGGA TTGCTTTCTG ACGAACGATT CCGGGCCGAT GCACATGGCG
TTCGCCCTGA AACGGCCGGC GGTGGCCTTG TTCGGACCGG GGCATCCGAC GCACTACGTT
CCCCGGCATG CCGGTGCCGA CAGCCTGATC TTTTACGAGC ACATCCTGTG CAGTCCGTGC
CTGTATCACA GCGATCTTCC CCCATGCCGG GGAGACAACC AGTGCATGAA AATGATCGCG
TCGGAGAAGG TGACCGCGGC ATGCCTCGCC CTGCTGTGGC CGGAGGGCGT GTCCATCGAG
GATCGAGCAC CGCCGACGTG GAAACCCGCA CCTCGCCGCC CGATCAATCG AACCCCCGAC
GGCAGACCTT TGGGGACGAT TGCCTTCCGG CATTAG
|
|---|
| Protein sequence | MNARQKIRID RMFGAPVAYM LNVAARVLGC VLRRDHSFPG RPGVICIAKF VGMGSILSAG
PMLQSIRRRY PGARLVFISS RNNAPLLQRM TLVDECLYIS EASLPAIAGT TLKVVWKLWR
LRPALYLDLE LYSFYSSILA TLSCARNRAG FYRKSTEFKD GLFTHLIFFN TGMPVEALYL
QMSIAAGAGA DHEAPEDVSI AILEKDRDEF SVFAKGWLEP GDRLLAVNPN ASDLCLERRW
PTACFAETIK ALLDRIPSLK VVLTGSPGER EHVEGLASVF DGYQGRVRNA AGRLSLGGFL
ALLNRADCFL TNDSGPMHMA FALKRPAVAL FGPGHPTHYV PRHAGADSLI FYEHILCSPC
LYHSDLPPCR GDNQCMKMIA SEKVTAACLA LLWPEGVSIE DRAPPTWKPA PRRPINRTPD
GRPLGTIAFR H
|
|---|
| |