Gene Sfum_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2229 
Symbol 
ID4459460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2737586 
End bp2739286 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content63% 
IMG OID639702995 
Producthypothetical protein 
Protein accessionYP_846346 
Protein GI116749659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC CGCACTCCAT GCCGGAACCG GAGGCGCGGG TATGGCGGGA CACGATCGTC 
GCGGCCCTCT GTTCCACCGC ACTGTTCCTG TTCGCTCATT TCCACGCGCT ATCGAATCCC
TACGTCGTCA ACGACGATGT ACGCCAGCAG GTTTACTGGA TGCAGCAGTG GCGGGATCCG
GGGCTCTACC CTGACGACCT GCTGACCGAC TACGCCCGCC GCTACGTTCC GTGGGGCGTC
CAGGGAATCT ACCGGGCGGC GTCCGAAGTG ATGAGCCCTC TTTTCTTCTC CAAGATCCTC
ACCGGCCTGC TGTTCGTTTT CTTTGCCCTG TGCCTCTTCC GGATCGGCAT GCTCATTGCC
GGCCGAGAAA CGGCCTGGTG TTGCGTTATC GTATTCTGGT TGATGCCTTT CTTCCTCGAC
AACCTCTCGG GAGGACTCTC CCGTGCCTTC GCCGGGCCGC TTCTGGCACT GTTCCTCCTG
TGCCGGCTGA AACGCGCGCC GTGGGCGATG GGCGTTACCC TGGTGCTCCA GGCGCTGTTC
ATTCCCTACA TCGCCGTCCT TTGCGCAACG GCCTGCGTCA TGGCCTGGGG GGCGAGGGTG
CTTGGCCGGG CCCCGTCGCC TCCTTTTCTT TCGAGGCCGT TTCACTTCAT GTTCCTGCTT
GCGGCCGCCG TGCCGGTCTA TTGCATGAGC TCCGGCATGG ACCTCGCGGG GTTCGGACCA
TTGGTTACGG AGGCCGACAT GGCGGGCCAT CCTGAATTCG GCATCCACGG GCGCTACTGG
ATCTTTCCCG GCCCGTCGGT TTTCCGGGAC CTGGTGGTGG ACCCCTGGGA GTACATCGCC
CTGTTTCGCG AAGGGGGGAC CGCGGCGGGC ATCGTGAGTG TTGCGATCAT CGTGATCGCC
CTGCTTTCGG GCGCGGCGCG CGCGCCGTGG CGTTCTTTGG AAAAGGTCGC GGCCCCGGCG
CTGTACCTTG CCCTTGCTTC CCTCTTCCTG TACGTTCTTG CCCGGGTATT CCTGCTGCGG
CTTTTCATCC CGTCGCGCTA CCTGATGTAC ACCGTCAACC TTTTCTATTG CCTGGGATTT
GCCGTTTGTC TGCAGGGACT GTGGAGAAGG TTGCCGCCGA GGGGCGGGCC GCTGCCTGTC
GTGCTGGTCC TGGTCCTGGT CCTGGTGTCG TCCGGGCTGA GGTTGAGAGG AGTGGCCGTT
TTTGACTATT CGGCGGATGC CGAGCTGTAC CGCGCCGTCG AACGGACTCC CAAACAGGCG
CTCATCGCCG GGCATCCGGC GACCATGGAC AACGTGATGA CGTTCGGACG CCGGAAGGTC
CTGGCCTCTT TCGAGCTCGC TCATCCCTGG TGCAAGGGGT ATTGGGACAG GGTGAAGCCG
CGCCTGGAAG ATACGTTCAA GGCCTACTAT GCCGCGGATG CGCAGACCGT AATCGCCTTT
TGTGCGCGGT ACGGCATTGA TTTTCTCGTC GTGGACGAAC GCCATTACGA GCCGTCGTTC
ATCGCCGGCC GGCCCTTTTT TGCCCCCTTC GACGATCTCA TCCGCAACGT TGCGGGGCAA
CGGCGCGATT TCGCCCTGCT GTCCTCGGAG TGTTTCGATT CGATGAAGGC GGGGCGGCAC
CACCGGCTGA TCGATATGCG GGAATTGCGA AAAGCAGCAG CCACGGAACC GGGCAATACG
GCTTTCCCGG GTGAACGCTA G
 
Protein sequence
MNVPHSMPEP EARVWRDTIV AALCSTALFL FAHFHALSNP YVVNDDVRQQ VYWMQQWRDP 
GLYPDDLLTD YARRYVPWGV QGIYRAASEV MSPLFFSKIL TGLLFVFFAL CLFRIGMLIA
GRETAWCCVI VFWLMPFFLD NLSGGLSRAF AGPLLALFLL CRLKRAPWAM GVTLVLQALF
IPYIAVLCAT ACVMAWGARV LGRAPSPPFL SRPFHFMFLL AAAVPVYCMS SGMDLAGFGP
LVTEADMAGH PEFGIHGRYW IFPGPSVFRD LVVDPWEYIA LFREGGTAAG IVSVAIIVIA
LLSGAARAPW RSLEKVAAPA LYLALASLFL YVLARVFLLR LFIPSRYLMY TVNLFYCLGF
AVCLQGLWRR LPPRGGPLPV VLVLVLVLVS SGLRLRGVAV FDYSADAELY RAVERTPKQA
LIAGHPATMD NVMTFGRRKV LASFELAHPW CKGYWDRVKP RLEDTFKAYY AADAQTVIAF
CARYGIDFLV VDERHYEPSF IAGRPFFAPF DDLIRNVAGQ RRDFALLSSE CFDSMKAGRH
HRLIDMRELR KAAATEPGNT AFPGER