Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2229 |
Symbol | |
ID | 4459460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2737586 |
End bp | 2739286 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639702995 |
Product | hypothetical protein |
Protein accession | YP_846346 |
Protein GI | 116749659 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGTCC CGCACTCCAT GCCGGAACCG GAGGCGCGGG TATGGCGGGA CACGATCGTC GCGGCCCTCT GTTCCACCGC ACTGTTCCTG TTCGCTCATT TCCACGCGCT ATCGAATCCC TACGTCGTCA ACGACGATGT ACGCCAGCAG GTTTACTGGA TGCAGCAGTG GCGGGATCCG GGGCTCTACC CTGACGACCT GCTGACCGAC TACGCCCGCC GCTACGTTCC GTGGGGCGTC CAGGGAATCT ACCGGGCGGC GTCCGAAGTG ATGAGCCCTC TTTTCTTCTC CAAGATCCTC ACCGGCCTGC TGTTCGTTTT CTTTGCCCTG TGCCTCTTCC GGATCGGCAT GCTCATTGCC GGCCGAGAAA CGGCCTGGTG TTGCGTTATC GTATTCTGGT TGATGCCTTT CTTCCTCGAC AACCTCTCGG GAGGACTCTC CCGTGCCTTC GCCGGGCCGC TTCTGGCACT GTTCCTCCTG TGCCGGCTGA AACGCGCGCC GTGGGCGATG GGCGTTACCC TGGTGCTCCA GGCGCTGTTC ATTCCCTACA TCGCCGTCCT TTGCGCAACG GCCTGCGTCA TGGCCTGGGG GGCGAGGGTG CTTGGCCGGG CCCCGTCGCC TCCTTTTCTT TCGAGGCCGT TTCACTTCAT GTTCCTGCTT GCGGCCGCCG TGCCGGTCTA TTGCATGAGC TCCGGCATGG ACCTCGCGGG GTTCGGACCA TTGGTTACGG AGGCCGACAT GGCGGGCCAT CCTGAATTCG GCATCCACGG GCGCTACTGG ATCTTTCCCG GCCCGTCGGT TTTCCGGGAC CTGGTGGTGG ACCCCTGGGA GTACATCGCC CTGTTTCGCG AAGGGGGGAC CGCGGCGGGC ATCGTGAGTG TTGCGATCAT CGTGATCGCC CTGCTTTCGG GCGCGGCGCG CGCGCCGTGG CGTTCTTTGG AAAAGGTCGC GGCCCCGGCG CTGTACCTTG CCCTTGCTTC CCTCTTCCTG TACGTTCTTG CCCGGGTATT CCTGCTGCGG CTTTTCATCC CGTCGCGCTA CCTGATGTAC ACCGTCAACC TTTTCTATTG CCTGGGATTT GCCGTTTGTC TGCAGGGACT GTGGAGAAGG TTGCCGCCGA GGGGCGGGCC GCTGCCTGTC GTGCTGGTCC TGGTCCTGGT CCTGGTGTCG TCCGGGCTGA GGTTGAGAGG AGTGGCCGTT TTTGACTATT CGGCGGATGC CGAGCTGTAC CGCGCCGTCG AACGGACTCC CAAACAGGCG CTCATCGCCG GGCATCCGGC GACCATGGAC AACGTGATGA CGTTCGGACG CCGGAAGGTC CTGGCCTCTT TCGAGCTCGC TCATCCCTGG TGCAAGGGGT ATTGGGACAG GGTGAAGCCG CGCCTGGAAG ATACGTTCAA GGCCTACTAT GCCGCGGATG CGCAGACCGT AATCGCCTTT TGTGCGCGGT ACGGCATTGA TTTTCTCGTC GTGGACGAAC GCCATTACGA GCCGTCGTTC ATCGCCGGCC GGCCCTTTTT TGCCCCCTTC GACGATCTCA TCCGCAACGT TGCGGGGCAA CGGCGCGATT TCGCCCTGCT GTCCTCGGAG TGTTTCGATT CGATGAAGGC GGGGCGGCAC CACCGGCTGA TCGATATGCG GGAATTGCGA AAAGCAGCAG CCACGGAACC GGGCAATACG GCTTTCCCGG GTGAACGCTA G
|
Protein sequence | MNVPHSMPEP EARVWRDTIV AALCSTALFL FAHFHALSNP YVVNDDVRQQ VYWMQQWRDP GLYPDDLLTD YARRYVPWGV QGIYRAASEV MSPLFFSKIL TGLLFVFFAL CLFRIGMLIA GRETAWCCVI VFWLMPFFLD NLSGGLSRAF AGPLLALFLL CRLKRAPWAM GVTLVLQALF IPYIAVLCAT ACVMAWGARV LGRAPSPPFL SRPFHFMFLL AAAVPVYCMS SGMDLAGFGP LVTEADMAGH PEFGIHGRYW IFPGPSVFRD LVVDPWEYIA LFREGGTAAG IVSVAIIVIA LLSGAARAPW RSLEKVAAPA LYLALASLFL YVLARVFLLR LFIPSRYLMY TVNLFYCLGF AVCLQGLWRR LPPRGGPLPV VLVLVLVLVS SGLRLRGVAV FDYSADAELY RAVERTPKQA LIAGHPATMD NVMTFGRRKV LASFELAHPW CKGYWDRVKP RLEDTFKAYY AADAQTVIAF CARYGIDFLV VDERHYEPSF IAGRPFFAPF DDLIRNVAGQ RRDFALLSSE CFDSMKAGRH HRLIDMRELR KAAATEPGNT AFPGER
|
| |