Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2226 |
Symbol | |
ID | 4459492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2728384 |
End bp | 2730663 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639702992 |
Product | glycosyl transferase family protein |
Protein accession | YP_846343 |
Protein GI | 116749656 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTAA AAGGGAGCGA AGTTTCCTCG AGGCGTTCCC GCCTTCTGGC GGGGTTGTTG GCCTGCCTTG CGCTCGGGGC GGCGGGGACG CTTCTGCTCG CCTGGAAAAC CGTTCGCGAT TTGCGTCCGC CGCCCGAAAG TCTCTCCCTC GGGGACGCCC CCGTGCGCAA AATGAAGATT CTCGACCGCA GCGGCATCCC GCTCTCGGTC ACTTACATCA ACCACTGGAA TCTTCACGAT GCCCTGCCCC TTCGGGACGT CCCGGAGCTT TTGAGGCAGG CGTTCATTAC CTCTGAGGAC AAGCGCTTCT TTGAGCATCA CGGGGTGGAC TGGCAGGCCC GGGGCCATGC CCTGTGGCAG AACGTGAAGG CGCTGAAAGC GGTGCGCGGC GCGAGCACGA TCACCGAGCA AACGGTGCGG ATGCTTCATC CGCGCCCTCG AACCCTCTGG TCCAGGTGGC TCGAAGGGAT CGAGGCGTAC CGGCTGGAAC GACGTTTTTC CAAAGCCGAA ATCCTCGAAT TCTACCTCAA CCAGGTTCCA TACGCGCACC GAAGACGAGG GGTGGTCCAG GCCGCAAGGC TCTACTTCGA CCGCGATCCG GATACTTTGA GCGTGCGGGA AATGCTGGCC CTCGCCGTCG TGGTGCGCGC TCCTTCGAGC TTTGATCTGC GCCGGGGGGG CCGGGGCGTG GATGGGGCCG TCAGGAGGCT GGCGGCGAAC ATGAAACGGC GCGGGACGCT CACCGAAGAC CAGTACCGGA GCGCCGTGGA AGACCGCATC GAGCTGCGCG AAGCACGGCC TCCGGTGGAC GCCACGCACT TCGTGCAGCA TCTCCATCGC GCCGGGGCGG AAGGAGCCGC GTTCGGCAGC ACCCTCGTCA CCACCCTGGA TGCGGCCCTC CAGGAGCGAG TTCGACACAT ACTCGGCAGT CGCCTGAGGG ATCTGCGCTC GAGCGCCATC GGCAACGGTG CCGTGCTGGT GGTGGATCAT CGGTCCGATG AAGTGCTGGC ATGGGTGAAC GGAGGCGCAA TGGCCGAGGA CGCCCCCGGT GCGTGGATCG ACGGCGTCAC CACGCCAAGG CAGCCGGGTT CCACCCTGAA ACCCTTCCTC TATGCCCTGG CGCTCGAAAT GGGCTGGACC CCCGCCACCC TCATTGACGA CTCGCCCGTG GCGCAGGCCG TCGGATCGGG GCTCCACAAC TTCCACAACT ACAGCCGAAC CTACTACGGG CCACTGCGGT TGCGGGAGGC GCTCGCCAAT TCGTTGAACG TTCCCGCCAT TCGCGCCATC CAGTTCACCG GGACGGAGCG GTTCCTCGGC CGGCTGCGCC TGCTCGGGTT TCAATCCCTG GCGCAACCGG CCGACTTTTA CGGGCAGGGC CTGGCCCTGG GCGACGGGGA GGTGAGCCTG TTCGAGCTGG TTCGCGCCTA CGCGGTTCTG GCTCGGCAGG GCGAGTACCG GCCACTGCGG ACGACCCGGG CTCCCGTGAC TGTGTCCGAG CCGCCGCGCC GCGTTTTCGC CGCGACCACG GCAGCCCTGA TTGGAGACAT CCTGTCCGAT CCCCAGGCCC GGCGGCTGGA ATTCGGCGAC GGGAACCTGC TGCGGCTGCC CGTTCAGACG GCCGTGAAGA CGGGGACGTC CACCGACCAC AGGGACAGTT GGATCGTGGG GTTTTCAAGC CGATACACCG TCGGAGTCTG GATGGGAAAT CTGGACCGCG GTCCGACCAA AGGCGTCACC GGCCTGGCGG GTCCCGGGCT GGTTTTGAGA GCGGTCTTCG CGGAGCTGAA TCGATACGGC GACGCGGCTC CCCTTCCTCC GTGTCCGGGC CTGGCGATGG CGACCATATG CGCCGAGAGC GGGCTTCCGG CCGGACCGAA CTGCCCCGGG TTGCAGGAGT GGTTCGAACC CGGGACGGTC CCCACCGGGG TGTGTTCCAT CCACGAACGG CCGGGCCGAC GCGATTCCGG CGGGGTCGTC GTCGAGGCGA ACCGCTCCCG GGAGCTGCGC CTGCAGCAGC CGACGCCCGG GCTGCGGCTC GCCATGGATC CTCGTATTCC CGACGAGCTC GAAGCTTTTC CGTTCAAGGT TCCCGAGCGG CCGCCGCCCA GCCGCATCGA ATGGCTGGTC GACGGAGAGG TGATCGGCGC AACGGGGCCC GGCGTGTGCC AATTCGCGTG GCCGCTCTCC AGGGGCGCTC ATCTGGCGCG CGCCCGGGTG TGGCGCGCCG ATGCGCCCGG AGCCGAGGAA ACGCCTGAGG TGCGGTTCAC CGTGGAGTGA
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Protein sequence | MTLKGSEVSS RRSRLLAGLL ACLALGAAGT LLLAWKTVRD LRPPPESLSL GDAPVRKMKI LDRSGIPLSV TYINHWNLHD ALPLRDVPEL LRQAFITSED KRFFEHHGVD WQARGHALWQ NVKALKAVRG ASTITEQTVR MLHPRPRTLW SRWLEGIEAY RLERRFSKAE ILEFYLNQVP YAHRRRGVVQ AARLYFDRDP DTLSVREMLA LAVVVRAPSS FDLRRGGRGV DGAVRRLAAN MKRRGTLTED QYRSAVEDRI ELREARPPVD ATHFVQHLHR AGAEGAAFGS TLVTTLDAAL QERVRHILGS RLRDLRSSAI GNGAVLVVDH RSDEVLAWVN GGAMAEDAPG AWIDGVTTPR QPGSTLKPFL YALALEMGWT PATLIDDSPV AQAVGSGLHN FHNYSRTYYG PLRLREALAN SLNVPAIRAI QFTGTERFLG RLRLLGFQSL AQPADFYGQG LALGDGEVSL FELVRAYAVL ARQGEYRPLR TTRAPVTVSE PPRRVFAATT AALIGDILSD PQARRLEFGD GNLLRLPVQT AVKTGTSTDH RDSWIVGFSS RYTVGVWMGN LDRGPTKGVT GLAGPGLVLR AVFAELNRYG DAAPLPPCPG LAMATICAES GLPAGPNCPG LQEWFEPGTV PTGVCSIHER PGRRDSGGVV VEANRSRELR LQQPTPGLRL AMDPRIPDEL EAFPFKVPER PPPSRIEWLV DGEVIGATGP GVCQFAWPLS RGAHLARARV WRADAPGAEE TPEVRFTVE
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