Gene Sfum_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2217 
Symbol 
ID4459483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2719254 
End bp2720087 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content59% 
IMG OID639702983 
ProductABC transporter related 
Protein accessionYP_846334 
Protein GI116749647 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.294499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG CAACAGAAGG CAACGTCGTA GCCAAGCATG TGAGCCTGGT GTACGACCCG 
CTGGGAGTGA ACGTGCTCGC CGTGGCCGAT TGCAGCTTCG AGATCGAAGC GGGATCCTTT
CTGGCCATCG TCGGACCCTC GGGCTGTGGG AAGACCACGT TGCTCAACAT GATCGCGGGC
TTCGACACTC CCACCGAGGG CGAAATATGG GTAGATGGGG CCTGTGTCGC CTCTCCCTCG
ATCCGTCTCA CTCCCGGGCC CGACAGGGTC GTGGTCTTTC AGCACGGGGC GCTGTTCCCG
TGGAGGACCG TTCTTGAAAA CGTGTGCTGG GGACCGGTGA TGCAGGGGAC CATGTCTCGG
GATGAGGCTG TCGAGAAGGG AAAGGAAATA TTGAAAATCG CGGGTCTCGA AGGCTGCGAA
AACGAATATC CCATGAACAT CTCCTCCGGG ATGCAGAGAC GGGTCGAGAT TGTCCGGGCA
CTGGTCAACG AACCCAAAAT ACTGCTCCTG GACGAACCCT TCCGGGCACT CGACGCCATG
ACCAAGTCGG TCATGCATCA GTACCTTCTC GATCTGTTCG ATGCCACCGG CAAGACCATC
ATGTTCATCA CTCACGACCT CGATGAGGCC ATTTTCCTGG CGGACAGGGT CTTTGTGATG
ACAACGAGGC CCGGGCGTCT CAAGCAGATG ATCGAGGTGG ATCTTCCCCG GCCGCGGAAT
TTGAAGACCA AGGTGACCGA CAGGTTTATC CAACTCCGGA ACGAGGCCCT CGACGCCGTT
CACGAGGAGG CTCAAAAGGC TTTCGAGCGG GGCGAGCGTG AAATGGCCAA GTAG
 
Protein sequence
MAKATEGNVV AKHVSLVYDP LGVNVLAVAD CSFEIEAGSF LAIVGPSGCG KTTLLNMIAG 
FDTPTEGEIW VDGACVASPS IRLTPGPDRV VVFQHGALFP WRTVLENVCW GPVMQGTMSR
DEAVEKGKEI LKIAGLEGCE NEYPMNISSG MQRRVEIVRA LVNEPKILLL DEPFRALDAM
TKSVMHQYLL DLFDATGKTI MFITHDLDEA IFLADRVFVM TTRPGRLKQM IEVDLPRPRN
LKTKVTDRFI QLRNEALDAV HEEAQKAFER GEREMAK