Gene Sfum_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2210 
Symbol 
ID4459511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2710264 
End bp2711961 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content65% 
IMG OID639702976 
Productradical SAM domain-containing protein 
Protein accessionYP_846327 
Protein GI116749640 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.362097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAA AGGAAGAAAC CGAAGACCGG CGTATCGCCC TCGTGTTTCC GCCCGCGATA 
CACCCCACCG GCCCTCCGCT CGGCGCGGCC GCCCTCAAGG CATTCCTGCT CTCGCGCGAT
CCGTCGCGTT CCGTCAGGGT GTTCGACCTC AACCTCGCCC ACTACGAACA GGCCTTGCGC
TGGATGCGGG AAGGGCGGCT GAAGATGAGC CTCCGGAAGA TGGACCACGC ATCCTCCGCC
GAGCGCGTGG CCGACACCTT CCGCTTTCTG CGGGGGGAAA AGGGGCTGGA TGCGTTCGCG
TCCCTGCCGG ACTACGATGA GCACGCCGGA TTTTTCAGCA GCTTCGAAAC CGTGCTCAAC
GGCCTCTTCG ACAGCTTCGC CCGGAAGCTC CTCGCCAGCC TGCGGGTCCC TCCCCTCGCC
GACGAATATT TCCGCGAGCT GATCCGCCCG GTGAAACGGT TTCGTCCGCG GCTGGCGGGA
TTTTCCATCC TCTTCAGCCA GCAGGTGTAC TTCGCCGCGA TCCTCGCCCG GTACCTGAAG
GAAGACGACG CGACGATCGT TTTCGGCGGG GCCACGCTCT CGGTCATGCC CCGCCCCGAG
GTCCTGCTCG CCGACCGGAC CGTGGTCCCC GTGGGCGAAA CCCGCGCCGG CATCCCTTTC
GGACGCTTCA TCGACGGGCT CATCGTCGGC GAAGGAGAAA CGGGCATCGA CGCACTCGCC
GGAGCGGGCG GCTGCGACCC GGCGCATGTC CCCGGCCTGG TTTACTCCGA TGCGGGACGG
GTCCGGCGAA ACGGTCCGCG CAGGATCGAG AAGCTCGAAG AGCTGCCCCT GCCCGATTTC
GATGACTGCA ACCCGGCGGC GTACCTGTCC CCGATGCCCA TCCTGCCGTA TCTTTCGTCG
CGGGGATGCT TCTGGAGAAG ATGCGCGTTT TGCACGCACC GGAAGACCTA CCTGGCCTAC
CGCGAAGAGC CCCCCGAATA CACCGTCTCG CGGCTTGCAG AGCTGAGCCG GCGGCACGGA
GCGGTCCTGT TCAGCCTGGT GGACGAAATG ATCCATCCGC ATCGCTTCAG CCGTCTTGCC
CGGAAAATCC TCGAAGCGGG GCTCGACATC CGTTACGCGG CCTACGCGAA ACCGACGGCG
CGCTTTGACG CGGCGCTGCT CGGGCGGCTG CATGCTTCCG GGGCCAGGGT TGTGATGTGG
GGAGTGGAAT CCGGAAACCA GAGGGTGCTC GACCTGATGC GTAAGGGGAC TCGCGCGGAC
CGCATGGGCC GGGTCCTGGA AGATGCCCGC CGCGCCGGCA TCCGGAACCT GGTTTTCGTC
ATGTTCGGTT TCCCTTCGGA AACCCGGCAG GAACGGGAAG ACACGATGCG TTTCCTGGAA
GCGCACCGGG ACAGCATCGA TGCGTTGTCT AAGTCCCGCT TCATCCTGCT CGAAGGCGCC
GACATGCTCG AAACCCCCGA GCGCTTTCAC ATCACCCGGG TACTGGATCG AACCGACCGC
GATCCCGTAT CCGTGGCGTT CGACTACGAA GTCTCCGACG GCCCGACCCA GGCCGAAGCC
CGGCGGTTCT ACGAAGAACG GATGCCGTAC TTGAACCGGT TCGGGCGCTC TCCGTTCTTT
CCCCGGTACC GCGACCACAT GCTCGTGCAC GCGGTGCTGC GCGATTCGCC GCGGGAATCC
ACACAGCACC ATGAGTAA
 
Protein sequence
MNTKEETEDR RIALVFPPAI HPTGPPLGAA ALKAFLLSRD PSRSVRVFDL NLAHYEQALR 
WMREGRLKMS LRKMDHASSA ERVADTFRFL RGEKGLDAFA SLPDYDEHAG FFSSFETVLN
GLFDSFARKL LASLRVPPLA DEYFRELIRP VKRFRPRLAG FSILFSQQVY FAAILARYLK
EDDATIVFGG ATLSVMPRPE VLLADRTVVP VGETRAGIPF GRFIDGLIVG EGETGIDALA
GAGGCDPAHV PGLVYSDAGR VRRNGPRRIE KLEELPLPDF DDCNPAAYLS PMPILPYLSS
RGCFWRRCAF CTHRKTYLAY REEPPEYTVS RLAELSRRHG AVLFSLVDEM IHPHRFSRLA
RKILEAGLDI RYAAYAKPTA RFDAALLGRL HASGARVVMW GVESGNQRVL DLMRKGTRAD
RMGRVLEDAR RAGIRNLVFV MFGFPSETRQ EREDTMRFLE AHRDSIDALS KSRFILLEGA
DMLETPERFH ITRVLDRTDR DPVSVAFDYE VSDGPTQAEA RRFYEERMPY LNRFGRSPFF
PRYRDHMLVH AVLRDSPRES TQHHE