Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2209 |
Symbol | |
ID | 4459510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2707608 |
End bp | 2710142 |
Gene Length | 2535 bp |
Protein Length | 844 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639702975 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_846326 |
Protein GI | 116749639 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGATA GGGTCCTCCC ATATTTGCCC GACGATATCT CCAATAAGCA GATCCCCATC CTCGTGGTGG ACGACCTTCG GGACAACCTC GATCTCATGG AAGCCCTGCT GGTCAGCGAA GGATTCGAAG TCGTTCATTT GATCCCCTCG GGCCAGGAGG CGCTGGAGTT CCTGGAAACG CACCGCGACA TCGGCGTCAT ACTGATGGAC ATGATGATGC CCGGGATCGA CGGTCATGAA ATGTGCCGGC GAATCACCAC CCACGAATCG ACCCGCCACA TACCGGTCAT CATCGTGACG GGAGGGGCGT TGCGGCACAA CGAAGCCGTG CAGAAAAGCT TCGCCGCGGG AGCCGTCGAT TTCGTCACCA AGCCCATCAA CGAAGTCGAA TTGTTCATGC GCATCCACTC CGCGCTGGCC CTTTACAGGG AACGCGTGAT TCGCCACCAC AAAACCCGCG AGCTGCGGGA GAGCGAAGAA AAATTCCGGG TCACCTTCGA CCAGGCACCG GTCGGCATCG CCCATGTCAA TGCGGACGGC CGTCTTCTGC TCATCAACCG GCGCCTGTGC GAAATGCTCG GGTTCCAGGA ACGGGAGCTG ATCGAGTCCT CCTTCCCGGA CCTCTGCGTA CCCGAGAACA GGGACGTTCA CGAACGCGAG CTGAAAAAGT CCGTCGAACA AGGACTCGAA TATCACGGCT TCGAAATTCC CCTGGTCCAT AAGGACGGCA GGATCATCTG GACCAAGCTC ACCCTTTCTC CCATGAAAGA CGCGGCGGGC GTCCCCAAGT ACTTCATACA CATTGTGGAA GACATCACCG AGCGCAAGAA TTTCGAGGAC AATCTCCGCC TGTCCGCCAC CGTGTTCGAG GGGAGCACGG AAGCCATCAT CATAACCGAC GCCCGGGCCA ACATACTCAG GGTCAACAGC GCCTTCACGG CCATGACCGG GTATGCCGAT CACGAAGTGG TGGGGAAGAA CCCACGCCTC CTGAAATCCG GAAATCACCA CGAGGAATTC TACCGCGCCA TGTGGGCCAC GCTGAGCAGC ACCGGGCAGT GGCAGGGCGA GATCTGGAAC CGTCGGAAAA ACGGCGATAT TTTCCCCGCC TGGCTGACCC TGTGCGCCGT GCGCAACAGC GAGGACAAGA TCACCAATTA CGTGGGAATC TCCAGGGACA TCACGCTGCG CAAGGAAGCC GAAGAGCGCC TCAGCTACCA GGCAAGCCAT GATGCCCTCA CCGGGCTGCC CAACCGGGCG CGGTTTCACG ACCGCCTGAC CCACGCCCTG GCGCGAGCCG GCCGCGACCG GCACGAATTC GCCATCCTGT TCCTCGACCT GGACCGTTTC AAAGTCATCA ACGACACACT GGGGCACACC GTGGGCGACT TTCTCCTGCA GGGGGTCACC AAGCGGCTGC TCGGAGGCAC CCGGGAATCG GACACCCTTG CCCGGTGGGG CGGCGACGAG TTCATCATCC TCCTGGAGAG CATCCGCGGA GCCGAGGATG CGGCCGTGGC CGCGCGAAGA ATCCTCGACG TCCTGGCCGA ACCTTTCAGC GTCCAGGGCC ACGAAGTGTT CGTCAGCGGC AGCATCGGGA TCAGCGTCTA CCCAAGGGAC GGCGAGGACG TCCAGGCCCT GCTCCGATGC GCCGACATCG CGATGTACAG GGCCAAGGAC AGCGGCAAGA ACGACTACCA GTTCTACGAA TCCACCATGA GCACGGGCGG GCTCGAACGG TTGAAACTCG AAGGCGACTT GCGCTACGCC TTGAAACGCA ACGAATTCGT GCTCCATTAC CAGCCCAGGG TCAACATCAA CACCGGCCTG ATCGTGGGCG CCGAAGCGTT GATCCGCTGG GATCTTCCCG ATCGAGGCCT GCTGTGGCCC CTGGATTTCA TCCCCCTGGC GGAAGAAAGC GGCTTCATCA TCCCCATCGG GGAGTGGGTC CTGAGAACAG CGTGCCTGCA GTGTAGGAAA TGGCAGGACG CCGGGGTTCC GCACCCCCGG GTCTCCGTGA ATCTGTCCAC TCACCAGTTC AAGAAAGACA ACCTCACCTC GACGGTGGAT CGAATTCTCA AGGAAACGGG GCTGAGCCCC GGGCTGCTCG AGCTCGAGAT CACGGAAAGC GCCATGATGG AAAACCTCGA AAAGGCCGTC GCGACCCTCC AGGGCCTTGC GGAACTCGGC GTCAACGTGG CCATCGACGA CTTCGGCACC GGGTATTCGT CCCTCGGTTA TCTCAAACGG TTCCCCATAG GGGCTCTCAA GATCGACCAG TCGTTTGTCC GGCACATTCC TTCCAATATT GACGATACGG CCATCGCCAT GTCGATCATC TCCCTGGGAA AGACCCTGAA CCTGAAGGTG GTGGCGGAAG GAGTCGAGAC CCAGGAGCAA CTGACGGTCC TTCGGAACTA CCAGTGCGAC GAAGCCCAGG GCTACCTGTT CAGTCAGCCG GTAGATGCCG ACCGCATGAC CGAATTCCTC GTGAACCCGT CCGGGTTGAA CCTGTCCGAT CTTTTCGAGC AATGA
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Protein sequence | MSDRVLPYLP DDISNKQIPI LVVDDLRDNL DLMEALLVSE GFEVVHLIPS GQEALEFLET HRDIGVILMD MMMPGIDGHE MCRRITTHES TRHIPVIIVT GGALRHNEAV QKSFAAGAVD FVTKPINEVE LFMRIHSALA LYRERVIRHH KTRELRESEE KFRVTFDQAP VGIAHVNADG RLLLINRRLC EMLGFQEREL IESSFPDLCV PENRDVHERE LKKSVEQGLE YHGFEIPLVH KDGRIIWTKL TLSPMKDAAG VPKYFIHIVE DITERKNFED NLRLSATVFE GSTEAIIITD ARANILRVNS AFTAMTGYAD HEVVGKNPRL LKSGNHHEEF YRAMWATLSS TGQWQGEIWN RRKNGDIFPA WLTLCAVRNS EDKITNYVGI SRDITLRKEA EERLSYQASH DALTGLPNRA RFHDRLTHAL ARAGRDRHEF AILFLDLDRF KVINDTLGHT VGDFLLQGVT KRLLGGTRES DTLARWGGDE FIILLESIRG AEDAAVAARR ILDVLAEPFS VQGHEVFVSG SIGISVYPRD GEDVQALLRC ADIAMYRAKD SGKNDYQFYE STMSTGGLER LKLEGDLRYA LKRNEFVLHY QPRVNINTGL IVGAEALIRW DLPDRGLLWP LDFIPLAEES GFIIPIGEWV LRTACLQCRK WQDAGVPHPR VSVNLSTHQF KKDNLTSTVD RILKETGLSP GLLELEITES AMMENLEKAV ATLQGLAELG VNVAIDDFGT GYSSLGYLKR FPIGALKIDQ SFVRHIPSNI DDTAIAMSII SLGKTLNLKV VAEGVETQEQ LTVLRNYQCD EAQGYLFSQP VDADRMTEFL VNPSGLNLSD LFEQ
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