Gene Sfum_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2205 
Symbol 
ID4459506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2703197 
End bp2704171 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID639702971 
ProductABC transporter substrate-binding protein 
Protein accessionYP_846322 
Protein GI116749635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAT TCTGGAGTAT TTTCACCGCG CTCTTGCTCC TTTGGGCCAC CGACTCGCTT 
GCCCAGGAGT CGTCCCGGAG AGTGTCCTAC CTCCCGCACT GGCTGCCCCA GTCGCAGTTT
GCCGGGTACT ATGTGGCCTG CGAAAAGGGA TTCTACAGGA AGCACGGCAT CGACATCGAG
ATCCTCCGCG GCGGTCCGGA CCGGTCCCCC ATGGAATACC TGCGCCGGGG GCGCGCGGAT
TTTGCCGGCA GTTTTCTGTC CTGCGCCATT CGAGAACGAG TACGCGGGTT GCGGTTGATC
AACATCGCGC AGATCATCCA GCGTTCCACT CAAATGCTTA TCGCGAAAAA ATCCAGTGGA
ATCGAGTCGC CCAAGGACAT GGACGGCCGC AGAGTGGGTT TGTGGGGGGC GGATTTCCAG
GTTCTGCCGA AGGCTTTCTT TATGAAGTAC GATCTGAACG TCAAGGAAAT CGAGCAGGGG
CCGACCATGA ACCTCTTCCT CCGGGGGGCG GTGGATGTGG CGTCGGCGAT GTGGTACAAC
GAGTACCATA CCGTGCTCAA TTCCGGAGTC AACGAAGACG AGCTCACGAC GTTCTTCTTT
TCCGATCATT GCGTGAATCT GCCCGAAGAC GGCCTGTATG CCCTGGAAGA TACCTGCAAA
AAAGATCCGG AGAAATGCCG CCGGTTCGTG ACGGCTTCGC TGGAAGGGTG GGCCTATGCC
TTCAGGCGCC CTGAAGAAGC GTTGGACATC GTGATGAAGT ACGTCGATGA GGCGAACGTG
GCAACCAACC GTTGCCACCA GAAGTGGATG CTCGAGCGCA TGAAAGACGT CATCCTTCCC
CCCGGCCTCG ATGTTCCCGT GGGAGTCCTC CGGGAAGAAG ACTATGCAAA TGTCGTGAAA
GTGCTCGAGA CCGGCGGGTT GGAGGGTGAG GTGCCGGCAT ATTCCTCTTT TTTCTTGAAC
TGTGTTGAGC AATGA
 
Protein sequence
MRKFWSIFTA LLLLWATDSL AQESSRRVSY LPHWLPQSQF AGYYVACEKG FYRKHGIDIE 
ILRGGPDRSP MEYLRRGRAD FAGSFLSCAI RERVRGLRLI NIAQIIQRST QMLIAKKSSG
IESPKDMDGR RVGLWGADFQ VLPKAFFMKY DLNVKEIEQG PTMNLFLRGA VDVASAMWYN
EYHTVLNSGV NEDELTTFFF SDHCVNLPED GLYALEDTCK KDPEKCRRFV TASLEGWAYA
FRRPEEALDI VMKYVDEANV ATNRCHQKWM LERMKDVILP PGLDVPVGVL REEDYANVVK
VLETGGLEGE VPAYSSFFLN CVEQ