Gene Sfum_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2200 
Symbol 
ID4459501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2697049 
End bp2697249 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content54% 
IMG OID639702966 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_846317 
Protein GI116749630 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000689795 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAG GTCGAGTCAA GTGGTTCAAT GATCAAAAGG GCTATGGATT CATCGAAACC 
GGCAGTGGGC CGGACGTGTT CGTCCATCAC AGCTCGATTG AAGGAGTAGG CTTCAAAACC
CTCAGCGAGG GCCAGGAAGT GACCTTCGAA ATTGAAAAGG GCGCAAAAGG CCCTCAGGCG
GTGCGGGTTA AGAAGCTCTA G
 
Protein sequence
MAEGRVKWFN DQKGYGFIET GSGPDVFVHH SSIEGVGFKT LSEGQEVTFE IEKGAKGPQA 
VRVKKL