| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2188 |
|---|
| Symbol | |
|---|
| ID | 4459097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2681416 |
|---|
| End bp | 2682651 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639702954 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_846305 |
|---|
| Protein GI | 116749618 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.891642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAA GGCCTCGCAT CTGCCACGTC ATAACGACAC CTACCGATCA GTACAGTTCG
GGCCTGCGGA CTCGGATGGA GGCGAAGATC GCGCGAGATC TCGGGTACGA TGTGGATGTC
GTCACCGGAG TCGGGCCGCG AGACGGCAGG CTAATTTCTG AAGGAGTGGA AGGCGTCACC
TACTGGCGCA TCCCTGCCCT GAGCAAGTAC ATTTACCCTC ATAGGGACGC TAAGGCCTTC
TTTGATATCT GCTCATTGTT TCGACGGAAC AGGTACCAGA TCGTTCAAAC GCATCTCGCC
AAAGCAGGAG TACTGGGGCG CCTTGCCGCC GGGTTGGCCG GTGTGCCGAT AATTGTTCAT
GATGTCCACG GCCCCAGTTT CTCGTCTTCG CAAAGCCTGC CGGGACGTGA GCTCTTCATC
AACCTGGAAC GGTTGGCGGG CCTGGTGACC ACTCATTATT TGTTTTACAC CAACCACCTC
AAAGACACTT TCGCCACGAA GGGAATTGGA AACAACGCCA AGCATAGGGT AATCTACCCG
GACTTGCGGT TAAAGCAATT CCTCGATGCT CCACCTCTCC CGGTGGAAGA GCGGTCAAGG
CTCAGACGGA TCTGGCATCT GGCGCCCGAT CACCTGGTTG TCGGCTACGT GGCCCGGATG
GTGCCATCCA AAGGCCACCA CCTGGCTATC GAGGCCTTCG CCCGATTGGC GGAGCGCTGG
CCCCACGCCA GGCTTGTGCT GGTGGGGGGC GCCATCTGGC CGGAAGAGCA AGCGTATTGC
CAGCGGTTGC AGGCTCAGGT TGATGCCCTC CACCTGGTAG AAAAGGTGAT CTTCACGGGA
CACCAACTGC AAGTCATCCC CTTTTATCAG ATGTTTGACC TTTTTGCTAT GCCGTCCCTC
TACGAAGGCA CTGCCAATGC CATGCTTGAG GCTATGGTCA TGGGACTGCC CGTAGTGGCC
TTCGATATCC CCGCAGTACA TGAATTCTGC CCATCTGAGA CGATCGTCTG TCCGTTCGCC
GACGCGAAGG GACTGGCGCA GGGACTGGAT CGGTGCCTGA CGCTGTTGTC AACGACTCCG
ACAGCCGTCT GTCCATCTCC GGCATTTCGC CAAGCCCTGG TAGCGAAATT CTCATCACGG
CGATGGCACC AGGAGTTGTC TGATTTTTAC ATGAGGTTGG TCGATGATCA GGGAGCTGGA
ATTCGCGACC CGAACTCTAG CAAACGGGGT GACTAA
|
|---|
| Protein sequence | MNPRPRICHV ITTPTDQYSS GLRTRMEAKI ARDLGYDVDV VTGVGPRDGR LISEGVEGVT
YWRIPALSKY IYPHRDAKAF FDICSLFRRN RYQIVQTHLA KAGVLGRLAA GLAGVPIIVH
DVHGPSFSSS QSLPGRELFI NLERLAGLVT THYLFYTNHL KDTFATKGIG NNAKHRVIYP
DLRLKQFLDA PPLPVEERSR LRRIWHLAPD HLVVGYVARM VPSKGHHLAI EAFARLAERW
PHARLVLVGG AIWPEEQAYC QRLQAQVDAL HLVEKVIFTG HQLQVIPFYQ MFDLFAMPSL
YEGTANAMLE AMVMGLPVVA FDIPAVHEFC PSETIVCPFA DAKGLAQGLD RCLTLLSTTP
TAVCPSPAFR QALVAKFSSR RWHQELSDFY MRLVDDQGAG IRDPNSSKRG D
|
|---|
| |