Gene Sfum_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2181 
Symbol 
ID4459090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2669454 
End bp2670170 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID639702947 
Productprotein-L-isoaspartate(D-aspartate) O-methyltransferase 
Protein accessionYP_846298 
Protein GI116749611 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA AGCGGGGCGA GGAGGAAAAA TACTTGAAGC AGCGCTTCGA GCGGGGAGTG 
GCGATGATCC ACAACAAGGA TCTGAAGACC GAAAGGGAGG TCAAGGCCTA CCTGCTGACC
CCGCGGGAAT TTTTCTGCAG GAAATGGAAT CTCGGCCGCG CCTACGATCA CGCGTTTCTC
GACATTCACT ACGGCGTGAC CATCTCCGGT CCGCACCTCG TCGGGCGCAT GACTTCCGCC
CTGGACCTCA AGCCCGGCGA AAAGGTGCTC GAAATCGGAA CGGGATCGGG TTACCAGGCG
GCGATGCTGG CCTATCTCAC CGACCGGGTC TACACGGTGG AAATCATCGA GCCCCTGGCC
CAGGAGACGG ATCGGCTCTA CACCGGGCTC GTCGCCGCCG GATACCCGGA GTACGCCGGC
ATCGGGCGCA AGGCCGATGA CGGATACTAC GGATGGGAGG AGCACGCGCC CTTCGACAAG
ATCATCGTGA CCTGCGGCAT CGACCACATC CCGCCGCCTC TGCTCAAGCA GCTCAAGACC
GGCGGAGTCA TGGTCATCCC CGTGGGACCG CCGGGGGCCC AGGTGGTCCT CAAGGTCACC
AAGAACCGGG ACGCCGACGG GAACATCGCC ATCGTCCGGG AAGACATCTA CCAGGGGCGC
AAGAAGGAAG CCTTCGTCCC GTTCACCAAG AAGGGGGGCG GCACGCACTT CAAATGA
 
Protein sequence
MKEKRGEEEK YLKQRFERGV AMIHNKDLKT EREVKAYLLT PREFFCRKWN LGRAYDHAFL 
DIHYGVTISG PHLVGRMTSA LDLKPGEKVL EIGTGSGYQA AMLAYLTDRV YTVEIIEPLA
QETDRLYTGL VAAGYPEYAG IGRKADDGYY GWEEHAPFDK IIVTCGIDHI PPPLLKQLKT
GGVMVIPVGP PGAQVVLKVT KNRDADGNIA IVREDIYQGR KKEAFVPFTK KGGGTHFK