| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2174 |
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| Symbol | |
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| ID | 4459528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2659123 |
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| End bp | 2660709 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702940 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_846291 |
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| Protein GI | 116749604 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAG TGGAAATATA CGACACGACG CTTCGGGACG GCACCCAGGC CGAAGACTTC
GCGCTTTCGG TGGAAGACAA GGTCCGGATC GCGCTGAAGC TCGATGACAT GGGGTTTCAT
TACATCGAGG GTGGATGGCC GGGTTCGAAT CCGAAAGACA TGGGGTTCTT CGACGAAATC
CGGAACTACG ATCTCAAACA CGCGCGAATC ACGGCCTTTG GAGCAACCCA CCATCCTTCG
CGCACCGCGG AAACGGATGA AAACCTGAAA GCGATCGTGG ACGCCGGGAC CGAGGTCGCC
ACGATTTTCG GCAAGAGCTG GACCGTGCAC GTGAAGGACG CCCTGAACAC GACGCTCGAA
CGGAACCTGG AGCTCATCCG GGACAGCCTC GGTTATCTGC GCCGGCATTT CCAGACCGTT
TTCTACGACG CCGAGCATTT TTTCGACGGT TTCAAGGCAA ACAGGGAATA CGCGCTCGCC
ACGATCCAGG CGGCCGTCGA CGCGGGCACC GAGTGCGTCG TCCTGTGCGA CACGAACGGA
GGCTGCCTCC CCGGCGATAT CCGGGACGCC GTCACCGCCG TCAAGGAGCG GTTTCCCGGA
ATTCCTTTCG GCATCCACAC TCACAACGAC TCCGATCTGG CGGTGGGGAA CACGCTGATC
GCCGTTGAGC TCGGCGCGGT CCAGGTACAG GGAACCATCA ACGGAATGGG CGAACGCTGC
GGCAACGCCA ACCTGTGTTC CATCATCCCC AACCTGATGC TCAAGATGGG GATTTCCTGC
ATCGACGAGG AGAATCTTCG CAAGATGCGC CCTGTCAGCC GGTACATCCT GGAAGTGGCC
AATGTACCGT CGAACCGTTA CCAGCCGTTC GTCGGACGCA GCGCCTTCGC TCACAAGGGG
GGAGTTCATA TCAGCGCCGT CGAGCGCAAC CCCGTCACAT ACGAGCACAT CAATCCCGAA
CGGGTCGGAA ACCGACGGCG CGTTCTGATT TCCGACCTGT CCGGTCGGGC GGCCATTAAG
CGCAAGGCGC AGGACTACGG CCTTCGGATC TCCAAGCGGG ATCCCATCGC CATGCAGGTG
CTTGAAGAGC TCAAAGACCT CGAAAATCAG GGATTCCAGT TCGAAGCGGC GGAGGCGAGC
TTCGAGCTGC TCATCAATCG CGCCATGGGC CGCAGCAAGC GCTATTTCGA GCTGCTGGGC
TTCCGGGTGA TCGACCAGAA GCTGGCCGAA GAGCATCCGC CGGTGGCCGA GGCAACGATC
CAGATCAAGG TGGGCGGCAA GGTCGAGCAT ACGGCGGCGC TGGGGAACGG CCCGGTGAAT
GCCCTGGACA ACGCCCTGCG CAAGTCCCTC GAAAAATTCT ACCCGCGACT CAAGGAAATG
GAACTGAGCG ATTACAAGGT CAGGGTGCTT CCGGGGAGCC CGGGAACGGC CGCGAGAGTC
AGGGTTCTGA TCGAGTCCCG GGATGCGCAG GATCAATGGA GCACGGTGGG CGTATCCCAC
GACATCATCG AGGCGAGTTG GCAGGCCCTT GTGGACAGCA TCAACTACAA GATGTACAAG
GTGGAAAAGA CCGACAGGGA AGACTGA
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| Protein sequence | MRKVEIYDTT LRDGTQAEDF ALSVEDKVRI ALKLDDMGFH YIEGGWPGSN PKDMGFFDEI
RNYDLKHARI TAFGATHHPS RTAETDENLK AIVDAGTEVA TIFGKSWTVH VKDALNTTLE
RNLELIRDSL GYLRRHFQTV FYDAEHFFDG FKANREYALA TIQAAVDAGT ECVVLCDTNG
GCLPGDIRDA VTAVKERFPG IPFGIHTHND SDLAVGNTLI AVELGAVQVQ GTINGMGERC
GNANLCSIIP NLMLKMGISC IDEENLRKMR PVSRYILEVA NVPSNRYQPF VGRSAFAHKG
GVHISAVERN PVTYEHINPE RVGNRRRVLI SDLSGRAAIK RKAQDYGLRI SKRDPIAMQV
LEELKDLENQ GFQFEAAEAS FELLINRAMG RSKRYFELLG FRVIDQKLAE EHPPVAEATI
QIKVGGKVEH TAALGNGPVN ALDNALRKSL EKFYPRLKEM ELSDYKVRVL PGSPGTAARV
RVLIESRDAQ DQWSTVGVSH DIIEASWQAL VDSINYKMYK VEKTDRED
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