| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2140 |
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| Symbol | |
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| ID | 4459564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2617307 |
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| End bp | 2618530 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639702906 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_846257 |
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| Protein GI | 116749570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.285517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA GGCCCCAGGT AAGACTGATT CCCGTTTTGG CGGCAGTTGC AGTGTTCACG
ATGTCCGTGA GCTTTTGGGC AACGGCATGT GCCGAGGACG TCATCAAGAT CGGCGCGGCC
GTGAGCCTGA GCGGCAAGTT CGCCCGTGAA GGAGAGTTTC TCAAGCAGGG CTATGATTAC
TGGAAGGATG CGGCCAATGC TCAGGGCGGA GTGAAAATCG GGGACAAGAA ATACAAGGTC
GAAATCGTTT ACAATGATGA CGAAAGTGAT CCGCAGACCA GCGCCCGCTT GACCGAAAAG
CTGATCACCG AGGACAAGGT GAAATTTCTA TTCGGCCCCT ATTCCTCAGG AATCGCAACT
GCAACGGCGG CCATCAGCGA AAAATACAAC ATGCTGACCA TGGTGCCGAT GGCAACCGCG
GACAGCATCT ACCAGCGCGG CTACCGCTAC GTTTTCTGTC CTTCGCCGCT GGCTAGCACG
GGCTTGTATC CCATTCTCGA TCTCATCGGC ACCCTGGAAA AGAGGCCTGC GACCATGGCC
ATAGTCGGTC CCGATTCCCT GTTCCCGAAC ATCACCGCTG AAGCCGCACA AAAGAAGGCC
GAGGAAATGG GGATCAAAGT GGTCTATCTC GGGAAATACC CTCAGAGTGC CGCCGACTTG
TCCTCGGTCG CAACCGCCGT CAAGGGCGCG AACCCGGAGG CGATCCTGTG CACCGGCTAC
ACCCAGGATT CCATCCTGTT GGTGAAGTCC ATGCGGGAAC TGCAGGTCAA TCCCAAGCTG
GTGGGCCTTG CCATGTCGAT CGCCGTTCCC GACTTCAGGA ACGCGCTCGG TTCGGCCGCC
AACCAAGTCA TGGGAACCGA CTACTGGGTG CCGACCCTCA CCTACACCGG AATCATCGTG
AAGGATTCCG ACACTTACGC AAAAACGTAC AAGGAAAAGT TCCAGAAGGA TCCCACATAC
CAGGCGGCCA GCGGCACCGC CGCGGGCATC ATCCTCCAGA TGGCCGTGGA GAGCGCGGGC
TCGCTCGACA CGAATGCAGT CCGGGAAGCC CTCTTGAAAT TGAAAGGGCA GACATTTTAC
GGCGACTTTC AATTCAACGA GCAGGGGGTC AACACGGCGG CGAAGCTGTC GGTCACTCAG
ATCCAGGATG GACAACCCAA GGTGGTTTTC CCCATCCAGG TGCGGCAGAC CCCGGTTCAG
TACCCCAAGG CCCCCTGGAA CTGA
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| Protein sequence | MKSRPQVRLI PVLAAVAVFT MSVSFWATAC AEDVIKIGAA VSLSGKFARE GEFLKQGYDY
WKDAANAQGG VKIGDKKYKV EIVYNDDESD PQTSARLTEK LITEDKVKFL FGPYSSGIAT
ATAAISEKYN MLTMVPMATA DSIYQRGYRY VFCPSPLAST GLYPILDLIG TLEKRPATMA
IVGPDSLFPN ITAEAAQKKA EEMGIKVVYL GKYPQSAADL SSVATAVKGA NPEAILCTGY
TQDSILLVKS MRELQVNPKL VGLAMSIAVP DFRNALGSAA NQVMGTDYWV PTLTYTGIIV
KDSDTYAKTY KEKFQKDPTY QAASGTAAGI ILQMAVESAG SLDTNAVREA LLKLKGQTFY
GDFQFNEQGV NTAAKLSVTQ IQDGQPKVVF PIQVRQTPVQ YPKAPWN
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