| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2137 |
|---|
| Symbol | |
|---|
| ID | 4459561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2612355 |
|---|
| End bp | 2614979 |
|---|
| Gene Length | 2625 bp |
|---|
| Protein Length | 874 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639702903 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_846254 |
|---|
| Protein GI | 116749567 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1615] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0489156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTT GGGCACGCTG GCCTCTCATC ATCCTGATCG GCATTTTGGG CATCTCGGCT
GTTGTTATCC TGTCCAGCCT TGCTTCGGTC GACTACCTGA TCAACATCTG GTGGTTCGAT
TCCCTCGGGT ACGGGCTTTA CTACTGGCTG CGGCTCCTCT ACCGTTACAT CGTCTTCGGA
GCGGTCACCC TCTTGTTTTT CCTGATTTTT TTTCTCAATT TCTGGGTGGC TTCGCGATAC
GTGGGGAATG TGCCGCCCGC CCCGTCGAAG TTCAGGATCG CCGCGCTCGA CCGGTACTTG
AACGTCGTCC GGATGTTCAG GTCCGGGTCG CTCTGGGTCT ACACCCCCTT GTCGCTTATC
CTGGCCGTCA TTATCGCCCT GCCGATATTC GAGAAGTGGG AAGCCTTTCT GCTGTACGTG
GCGGGACCGA AGACGGGTGT GCCGGACCCG GTTTACGGCA AGGACATCAG CTACTACCTG
TTTTCTTATC CCATCTATAC GCTTGTCCAG CGCCGGCTGC TCATCGCCTT CGTGCTGCTG
CTCGTTGGCC TGGTGGCGCT CTACCTGCTC GAGCGCCGGC TCCTCGCCCG GCAGGAGCAA
CCCATTCCCG CGGGGGCCAG GCTGCATCTG AGCATTCTCA TTCTCCTGAT TTTTCTCATC
GAGACCTGGG ACTACGTTTT GCAGCGCTAC GAGCTCCTCT ACAGCGAGGC GCACATGCCT
CTGTTTTACG GGGGCGGTTT CGTCGAAATG TACGTCATTT GGGCGCTCAT CTGGTTGACC
CTTTTCTTCC TCATGGGAAC CGCCTTCTCA ATGATCGCAT TCATCCAGAC CCGCAAGGGG
CTGAAACCGC TGGTCGTCTT CGCCGTGGGA TTCGTGCTCG TCCTGGGCCT GCGCTATTCC
GCGTTCCTGC CGGCGACCGT GGAAAAACTC GTGGTGAAAC CCAATGAGGT TTCACGGGAG
AGAGACTTCA TCGTCAATAA CATCAAAGCC ACTCTCTCCG CATACAACCT CAACACGGTC
CAGACGCGCG ATTTCACCCC GGCCCGCACT GCGGCCGATG TCGCGTCGCC GAAGGTCAAG
GCGCAATTGA GGAATATTCC CGTCTGGGAC GGGGAGCTCC TGGACGACGT CTACAAGCAG
CTCCAGCAGC TGCGCACCTA CTATACCTTT CCCAGCGTGG ATGTGGCGCG GTACACGGTC
AACGGGATGC CTCAGCAGGT TTTCCTCAGC GTGCGCGAGC TCGATTATAC GCTCATTCCC
GAAGCGGCCC GCAACTGGGT GAATGAACAC CTGTCCTACA CCCACGGCTA CGGCGCGGTC
ATGACGCCGG CCAGCCAGGG CGGGGACGAA CCCATGACTT GGTTCATCAA GGGGATTCCC
CCCGAGTCCG AATACGGCTT CAGGATCGAA CAACCGGGGG TCTACATCGG ACTGGGTTCC
TACACCTACG TCATCGCGCC CAACGACGCC GGGGAAATCG ACTACCCGAA AGGAAACAGC
AACACCATGG TGAGCTACAA GGCCGAGGAC GGCGTTCCCC TGTCGTCCTT TCTCAGAAGG
ATCCTCTTCG CCTATCACTT CGGAGACCGC AACCTCCTGT TCACCACCAA GACAACTCCG
GACAGCAAGA TACTCTTTCG CAGAAATCTC CTCGAACGGA TCCGGGTCCT CACGCCCTTC
CTCCTTCTGG ACGGAGATCC CTATGCGGTG GTGACACCCG GCAAGCTCTA CTGGATCCAG
GATGCCTATA CGACTTCGGA ATTCTACCCC GGGGCCACTC CCACACTGTG GGGCAGGGAC
AGGTTCAACT ACATTCGCAA CTCCGTGAAG ATCGTCGTGG ACGCATTCAG CGGAAAGGTG
GAATATTACG TATTCGAGCC CGGCGATCCC ATTGTGCGCG CCTATTCGAG GATCTATCCG
GGAGTGTTCA GAAATGCCGA CCAGATGCCG CCCGAGCTCA AGGCCCAGGT CCGTTATCCG
CAGGACATTT TCGAAATCCA GATGAACATC TACGCAAAGT ATCAGCAAAC CGATCCGGAA
GTCTACTACC AGCAGGAAGA CATGTGGGAA CCCGCCAAGA CTTTCCAGGA CAGGACTCCA
GTGACCATCA AGCCTTACTA CGTGACACTG GATCTCATCG ATCCGAGCCG CTTCGATTTC
CTTCTGCTCG CACCCATGAG CCCCAAAGGA CGCGACAATC TCAGGGCGCT GGCGCTGGCC
GGCTCCGACC CGCCCCATTA CGGAAAGATC ATCGTCTACA ACTTCCCAAA GGGCGAACTG
ATCTACGGAC CCTCGCAAAT CTACGCACTG ATCAACCAGG ACACAAGGAT ATCCGAACAG
TTCACACTCT GGGACCAGGT GGGGTCGCAG GTCGCCAGGG GCAAGATGAT CATTCTGCCC
ATCAGCAACA TGATTCTCTA CATCCAGCCG GTCTACCTGA AGTCTGCGAC AAAGCTCAAG
ATCCCGGAAT TGAAGCGGAT CATCATGAGC CAGGGGCAGA TCGTGGTGAT GGAACCATCC
CTCGAGGAGG CCTATGCGAA ATTGCAGGAG CGGATCAAGC TGGAAATCGA TCGGGTGGAC
AAGCGGTTCG CCCCCCTGTT GCCGGGTTCT CCCGCGGGGA GGTAG
|
|---|
| Protein sequence | MNRWARWPLI ILIGILGISA VVILSSLASV DYLINIWWFD SLGYGLYYWL RLLYRYIVFG
AVTLLFFLIF FLNFWVASRY VGNVPPAPSK FRIAALDRYL NVVRMFRSGS LWVYTPLSLI
LAVIIALPIF EKWEAFLLYV AGPKTGVPDP VYGKDISYYL FSYPIYTLVQ RRLLIAFVLL
LVGLVALYLL ERRLLARQEQ PIPAGARLHL SILILLIFLI ETWDYVLQRY ELLYSEAHMP
LFYGGGFVEM YVIWALIWLT LFFLMGTAFS MIAFIQTRKG LKPLVVFAVG FVLVLGLRYS
AFLPATVEKL VVKPNEVSRE RDFIVNNIKA TLSAYNLNTV QTRDFTPART AADVASPKVK
AQLRNIPVWD GELLDDVYKQ LQQLRTYYTF PSVDVARYTV NGMPQQVFLS VRELDYTLIP
EAARNWVNEH LSYTHGYGAV MTPASQGGDE PMTWFIKGIP PESEYGFRIE QPGVYIGLGS
YTYVIAPNDA GEIDYPKGNS NTMVSYKAED GVPLSSFLRR ILFAYHFGDR NLLFTTKTTP
DSKILFRRNL LERIRVLTPF LLLDGDPYAV VTPGKLYWIQ DAYTTSEFYP GATPTLWGRD
RFNYIRNSVK IVVDAFSGKV EYYVFEPGDP IVRAYSRIYP GVFRNADQMP PELKAQVRYP
QDIFEIQMNI YAKYQQTDPE VYYQQEDMWE PAKTFQDRTP VTIKPYYVTL DLIDPSRFDF
LLLAPMSPKG RDNLRALALA GSDPPHYGKI IVYNFPKGEL IYGPSQIYAL INQDTRISEQ
FTLWDQVGSQ VARGKMIILP ISNMILYIQP VYLKSATKLK IPELKRIIMS QGQIVVMEPS
LEEAYAKLQE RIKLEIDRVD KRFAPLLPGS PAGR
|
|---|
| |