Gene Sfum_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2135 
Symbol 
ID4459559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2610216 
End bp2610935 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content59% 
IMG OID639702901 
Productprecorrin-2 C20-methyltransferase 
Protein accessionYP_846252 
Protein GI116749565 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0352605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCA CTCTTTACGG GGTCGGCGTC GGGCCCGGGG ATCCGGAACT GCTCACGCTG 
AAGGCGGTGA AAGTTCTGAA GGAAGCGGCC CATGTTTTTG CCGCTTCCTC GTCCAGCAAC
GATTACAGCC TGGCGCACGA CATCGTGCGG GAGCATCTGC CGCCCGGAAC GCCCATCGAC
CAGCTGGCTT TTCCCATGAC ATTCGATTCC GAACACCTGG AAAATGCATG GACGGCCAAC
TGCGAACAGG TGGTCGAGAT TCTCAGGCAG GGAAAGAACG TCGCCTTCAT CACACTCGGA
GATCCGCTCA CCTTCAGCAC GTTCATCTAT CTCATGAGGA AGGTGCGCAG CAGGCTTCCC
GATGTCAACG TCGTCGTCGT CCCCGGCATC ACCTCCTACC AGGCCGCCGC GGCCTGCGCC
AATCTGCCCC TGGCCGAAGG CGAGGAAGCC ATCACCATCA TATCGGGAGC CAAGGGCGGA
ACCCGCCTGA ACGCGGCGAT CGAAACGGCC GACAATGTGG TGCTCATGAA GACATACAAG
CAGTTTCCCC AGATCCTGGC GCAGATCGAG GAAAAGGGGC TCGAAGACAA GTGCTGTTTC
ATCAGCCGCT GCGGGCTTGA GGGCGAGATT GTGGAACGGG ACTATCGGAA GATGAGGACG
CTCAAACCTC ACTATCTCTC ACTCATGATC ATCAAGAAAC GCGGCATGGA ACCCCGGTGA
 
Protein sequence
MFGTLYGVGV GPGDPELLTL KAVKVLKEAA HVFAASSSSN DYSLAHDIVR EHLPPGTPID 
QLAFPMTFDS EHLENAWTAN CEQVVEILRQ GKNVAFITLG DPLTFSTFIY LMRKVRSRLP
DVNVVVVPGI TSYQAAAACA NLPLAEGEEA ITIISGAKGG TRLNAAIETA DNVVLMKTYK
QFPQILAQIE EKGLEDKCCF ISRCGLEGEI VERDYRKMRT LKPHYLSLMI IKKRGMEPR