Gene Sfum_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2134 
Symbol 
ID4459558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2609116 
End bp2610189 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content63% 
IMG OID639702900 
Producttransport system permease protein 
Protein accessionYP_846251 
Protein GI116749564 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0133047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAA CGGTTCGGCG TCACACGGTG CTGTCGGGTC ATTGCGGGAT TTCCGTGCTG 
TGCTGGGCCG GATTTGTCCT CCTGATTGTC GTTGCCGCGT TCCTCGCTTC GGGAATCGGC
TCCTTCGAAA CGTCCTACCG CACGATATTC CGGCTCTGGA TATCCCCCTT TGATTCCGAT
TCCGCGGCGG GCATCGATGA TACGGTGCGA TACATCGTTA TCAACGTGCG GCTGGCCAGA
GTCTGCCTCG CATTCATCGT GGGCGCGGCA CTGGCGCTTG CGGGCACCGT CTACCAGGGA
GTGCTGCTCA ATCCGCTGGC CGACCCTTTC ACGCTCGGGG TCTCCACGGG AGCGGCCTTC
GGCGCCTCGC TGGCGATTCT TCTGGGACTG GGGGGCATGC AGCTTTCGGG GATCAGCGGC
CTGCCCCTGG CGGCCTTTGC CGGAGCGATG CTCGCGCTCT ACCTGGTCTA TCTGCTGGGG
CGCATTGACG GGAGGATCCA CGCCACCACG CTGGTGCTTG CGGGGATCAT CGTATCCACC
TTTCTGTCGG CATGGATCAG CCTCCTCAAG AGTCTGAACG AAGACTCGGT ATCCACCATC
GTCTTCTGGA TCATGGGGAG CCTTTCGGGC AAGAGCTGGA CTCATGCCGT CCTGGTGCTG
CCATATCTGG TGGCGGGCGG GGCCGGGATA CTCATCTTCA CCAGGGAGCT CGATATCCTG
AGCCTGGGGG ACATCCAGGC GCAACATCTC GGCGTCAACG TCCAGAGGGT ACGATTCTGG
CTGCTCCTGG CCGCTTCGCT GGCGACCGCC GCGGCGGTGG CGGTGAGTGG GATCATCGGG
TTCGTCGGGC TTGTTGTGCC GCATCTCGCG CGCCTGGTCG TGGGACCCCG GCACGGGCGA
CTCATTCCGG CGACCCTGTT GACCGGCGGA TTGCTCGTGC TCGTTTCCGA CACCATCGCA
CGAAGCCTGC TGCCGAACGG CGAGGAACTG CCGGTAGGCG TCGTGACGGC GATCCTTGGA
GGACCCTTCT TTTGTTACCT GCTGCTGCAT CGCAAGAAGT ACCTGCAATT GTGA
 
Protein sequence
MERTVRRHTV LSGHCGISVL CWAGFVLLIV VAAFLASGIG SFETSYRTIF RLWISPFDSD 
SAAGIDDTVR YIVINVRLAR VCLAFIVGAA LALAGTVYQG VLLNPLADPF TLGVSTGAAF
GASLAILLGL GGMQLSGISG LPLAAFAGAM LALYLVYLLG RIDGRIHATT LVLAGIIVST
FLSAWISLLK SLNEDSVSTI VFWIMGSLSG KSWTHAVLVL PYLVAGGAGI LIFTRELDIL
SLGDIQAQHL GVNVQRVRFW LLLAASLATA AAVAVSGIIG FVGLVVPHLA RLVVGPRHGR
LIPATLLTGG LLVLVSDTIA RSLLPNGEEL PVGVVTAILG GPFFCYLLLH RKKYLQL