Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2132 |
Symbol | |
ID | 4459556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2607325 |
End bp | 2608224 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639702898 |
Product | periplasmic binding protein |
Protein accession | YP_846249 |
Protein GI | 116749562 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00334395 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAGCCTT TTCGATGGAT CCTGGCATTC CTTCTGGTCG CGTCGATTCT TCACACCCGC GCCGGGGCGG TGCAGATCAC CGACGATCTC GGCACGACCG TCACGCTTTC TCAGTCGGCC GGGCGCATCA TCTCCCTGTA CGGAGCCTTC GCGGAAATGC TCTACGCCGT CGGGGCTGGC TCCCGGTTGG CGGCGCGCAC CCAGGCGGAT GCTTATCCCC CTGAAATCCT GAAACTGCCG TCGGTGGGGA CCCACATGAA GCCCAATTTC GAAATGATCA TCGGCTTCAA ACCCGACCTG GTGATCCAGA GCGCCAGCCG CCGCGAGGAG ATGCCCGACA TGGAACGCTT GTCCGGAGCG GGGATTCCGG TGGCGGTGTT TGCCCCGAAG AGTTTTGAGG ACATCTTTTC GACCATGGAG CGGCTGGGAG TTCTCACCGG TTGCGAAGGC GAAGCCGGAG CGGCCGTTGC CCGGATGAAG CAGCGGCTGG CGCGCGTACA GGCGAAGCTC GCCGGCGTCG AGAAGCGGCG GCGCGTTTTT TTCGAGGTCC GCGCGGAGCC GCTCACGGGT GCCGGGCGCG GCTCCATCGT GCAGCAGATC CTGGCTGCGG CCGGGGCCGA GAACGTTCTG CGGAGCGAGA AAGCCATCGT GCAATACAGT CTCGAGGCCC TGCTGCTCGA CGACCCGGAT GTGTACGTCA TGCAGCGGGG TCCGATGAAC CGGAACCCCG CCGAACTGGC AGCGCGGGCG CATTTCGATC GTTTGAGGTG CGTGAAGGAG GGCAAGATCG TTCCTGTGGA TGAATTCATC TTTTCGAGGC CGGGCCCGCG TTGTGTGGAA GCCGTCGAGC AACTTGCCGC GGCGCTCTAT CCGACGATAT TCGACGAGGG CGGGCGTTAG
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Protein sequence | MKPFRWILAF LLVASILHTR AGAVQITDDL GTTVTLSQSA GRIISLYGAF AEMLYAVGAG SRLAARTQAD AYPPEILKLP SVGTHMKPNF EMIIGFKPDL VIQSASRREE MPDMERLSGA GIPVAVFAPK SFEDIFSTME RLGVLTGCEG EAGAAVARMK QRLARVQAKL AGVEKRRRVF FEVRAEPLTG AGRGSIVQQI LAAAGAENVL RSEKAIVQYS LEALLLDDPD VYVMQRGPMN RNPAELAARA HFDRLRCVKE GKIVPVDEFI FSRPGPRCVE AVEQLAAALY PTIFDEGGR
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