Gene Sfum_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2132 
Symbol 
ID4459556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2607325 
End bp2608224 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content64% 
IMG OID639702898 
Productperiplasmic binding protein 
Protein accessionYP_846249 
Protein GI116749562 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00334395 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGCCTT TTCGATGGAT CCTGGCATTC CTTCTGGTCG CGTCGATTCT TCACACCCGC 
GCCGGGGCGG TGCAGATCAC CGACGATCTC GGCACGACCG TCACGCTTTC TCAGTCGGCC
GGGCGCATCA TCTCCCTGTA CGGAGCCTTC GCGGAAATGC TCTACGCCGT CGGGGCTGGC
TCCCGGTTGG CGGCGCGCAC CCAGGCGGAT GCTTATCCCC CTGAAATCCT GAAACTGCCG
TCGGTGGGGA CCCACATGAA GCCCAATTTC GAAATGATCA TCGGCTTCAA ACCCGACCTG
GTGATCCAGA GCGCCAGCCG CCGCGAGGAG ATGCCCGACA TGGAACGCTT GTCCGGAGCG
GGGATTCCGG TGGCGGTGTT TGCCCCGAAG AGTTTTGAGG ACATCTTTTC GACCATGGAG
CGGCTGGGAG TTCTCACCGG TTGCGAAGGC GAAGCCGGAG CGGCCGTTGC CCGGATGAAG
CAGCGGCTGG CGCGCGTACA GGCGAAGCTC GCCGGCGTCG AGAAGCGGCG GCGCGTTTTT
TTCGAGGTCC GCGCGGAGCC GCTCACGGGT GCCGGGCGCG GCTCCATCGT GCAGCAGATC
CTGGCTGCGG CCGGGGCCGA GAACGTTCTG CGGAGCGAGA AAGCCATCGT GCAATACAGT
CTCGAGGCCC TGCTGCTCGA CGACCCGGAT GTGTACGTCA TGCAGCGGGG TCCGATGAAC
CGGAACCCCG CCGAACTGGC AGCGCGGGCG CATTTCGATC GTTTGAGGTG CGTGAAGGAG
GGCAAGATCG TTCCTGTGGA TGAATTCATC TTTTCGAGGC CGGGCCCGCG TTGTGTGGAA
GCCGTCGAGC AACTTGCCGC GGCGCTCTAT CCGACGATAT TCGACGAGGG CGGGCGTTAG
 
Protein sequence
MKPFRWILAF LLVASILHTR AGAVQITDDL GTTVTLSQSA GRIISLYGAF AEMLYAVGAG 
SRLAARTQAD AYPPEILKLP SVGTHMKPNF EMIIGFKPDL VIQSASRREE MPDMERLSGA
GIPVAVFAPK SFEDIFSTME RLGVLTGCEG EAGAAVARMK QRLARVQAKL AGVEKRRRVF
FEVRAEPLTG AGRGSIVQQI LAAAGAENVL RSEKAIVQYS LEALLLDDPD VYVMQRGPMN
RNPAELAARA HFDRLRCVKE GKIVPVDEFI FSRPGPRCVE AVEQLAAALY PTIFDEGGR