Gene Sfum_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2125 
Symbol 
ID4459549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2600044 
End bp2600520 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content59% 
IMG OID639702892 
Productphosphodiesterase 
Protein accessionYP_846243 
Protein GI116749556 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000700609 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCG TGGTGATGTC GGACACGCAC CTGGAGCGGG TGACCGACCG GTTCGAATCC 
CTGTGCGCCG CCTATTGCGA AGGGGCGGAT CTGGTGATCC ACCTGGGCGA CTGGGCGAGA
CATTCGGTCC TGAATTTCCT GGAGCGCTAT CCCCTGGAAG CCGTGGCGGG CAACATGGAC
GATTCCGGGA TACACGAAAG GCTCCCCGTA AAGAAAGTCA TCCGGGTGCG GGGGCACCGT
CTCGGAATCA TACACGGTTG GGGATCGCCG GTCGGTTTGA GACACAGGCT CATGGACGAA
TTCGAAAACG TCGAGGCGAT TCTGTTCGGA CACACGCACC AGGCGCTGCA ACTGGTGGAA
CACGGCATAT TCTGGTTCAA CCCGGGCTCC GTTTATCTTG GACGCGGGGA ACGGGCCAAC
AGCCTGGGAA TTCTCAATAT CGAGGACCGC ATAACGGGGG AGATCGTCAC TCTCTAG
 
Protein sequence
MKIVVMSDTH LERVTDRFES LCAAYCEGAD LVIHLGDWAR HSVLNFLERY PLEAVAGNMD 
DSGIHERLPV KKVIRVRGHR LGIIHGWGSP VGLRHRLMDE FENVEAILFG HTHQALQLVE
HGIFWFNPGS VYLGRGERAN SLGILNIEDR ITGEIVTL