Gene Sfum_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2122 
Symbol 
ID4459581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2595482 
End bp2596957 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content59% 
IMG OID639702889 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_846240 
Protein GI116749553 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG0517] FOG: CBS domain 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00100541 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAACC ATCAGCCCGG TATCCCTGAA GCGCTGACTT TTGACGATAT TACCCTGCTT 
CCGGACTACT CCGAGGTGTT GCCGGTGGAA ACCAACGTTT CAACCCGGCT CACCCGCGAA
ATCCGCATGA ACATTCCGCT GGTCAGTGCC GCCATGGATA CCGTCACCGA GTCGGATACG
GCCATAAGTA TTGCCCGCGA AGGGGGAATC GGCATCATCC ACAGGAACAT GAGCGTCGAA
CAGCAGGCTC AGGAAGTGAA CAAGGTCAAG AAATCGGAAA GCGGCATGAT CCTCGATCCG
GTGACCGTGG ACCCCGATCA GAAAATCGGG GAAGTCCTCG ACCTGATGTC CCGGTACCGC
ATATCGGGCG TGCCGGTGGT CAAAGGCGAG CGACTGGTGG GCATCATCAC CAACCGGGAC
CTGCGCTTCG AGACCGACGA AAGCATAAAG GTTTCGGAAG TCATGACCAA GGACGACCTG
GTGACCGCCC CCGTGGGAAT ATCGCTGGAA GACTCCAAGA AGCTCCTCCA GAAAAGGAGA
ATCGAGAAGC TCCTCGTGGT GGACGATTCC GGCCGGCTGA AGGGACTGAT CACCATCAAG
GACATCATGA AAATCAAGAA GTACCCGAAT TCCTGCAAGG ATCAACTCGG ACGCCTGCGG
GTGGGCGCGG CCCTCGGGGT CGGCAAGGAC ACCCTGGCCA GGGCCGCGGC ACTTTGCAGC
GTGGGAGTCG ATGTGTTTGC GGTGGACAGC GCCCATGGCC ATTCGCAAAA CGTGCTCAAA
GCGGTGAAAC TGATCAAGGC CGAATTCCCC GCTGTCCAGA TCATCGCGGG CAATGTGGCC
ACCGCATCGG GAGCCGAAGC CCTGATCAAG GCGGGGGCCG ATGCGGTCAA GGTCGGCGTG
GGACCCGGCT CCATCTGCAC CACGCGTATC GTGGCCGGTG TCGGTGTGCC GCAGGTCACG
GCCATCATGG AATGTAACCG GGTGTGCAAG GAGCACGGCG TTCCCCTGAT CGCGGACGGC
GGGATAAAAT ACAGCGGCGA CATCGTGAAG GCGGTTGCGT CCGGAGCCGA GTGCGTGATG
ATCGGAAGCC TGTTTGCCGG AACGGACGAG AGTCCGGGAG AGACCATTCT GTACCAGGGC
CGAAGCTACA AGGTGTACCG TGGGATGGGC TCTCTCGGTG CGATGAAGGA AGGCAGCAAG
GACCGTTACT TCCAGGACGA GGTCTTCGAA CCGAAGAAAC TGGTCCCGGA AGGAATCGAG
GGGAAAGTCC CCTACCGGGG CCCCATCACC GACGTCATTC ATCAACTGAT CGGCGGATTG
AGGGCCGGAA TGGGCTATCT GGGATGCGGC ACCCTCGAGG ATCTCAGGAC CAGGGCCCGG
ATGATGAGGA TCACCAGCGC CGGTCTGAGG GAAAGCCACG TTCACGATGT CATCATCACC
AAGGAAGCTC CCAACTATCA AGTCGACCTC AAGTAG
 
Protein sequence
MQNHQPGIPE ALTFDDITLL PDYSEVLPVE TNVSTRLTRE IRMNIPLVSA AMDTVTESDT 
AISIAREGGI GIIHRNMSVE QQAQEVNKVK KSESGMILDP VTVDPDQKIG EVLDLMSRYR
ISGVPVVKGE RLVGIITNRD LRFETDESIK VSEVMTKDDL VTAPVGISLE DSKKLLQKRR
IEKLLVVDDS GRLKGLITIK DIMKIKKYPN SCKDQLGRLR VGAALGVGKD TLARAAALCS
VGVDVFAVDS AHGHSQNVLK AVKLIKAEFP AVQIIAGNVA TASGAEALIK AGADAVKVGV
GPGSICTTRI VAGVGVPQVT AIMECNRVCK EHGVPLIADG GIKYSGDIVK AVASGAECVM
IGSLFAGTDE SPGETILYQG RSYKVYRGMG SLGAMKEGSK DRYFQDEVFE PKKLVPEGIE
GKVPYRGPIT DVIHQLIGGL RAGMGYLGCG TLEDLRTRAR MMRITSAGLR ESHVHDVIIT
KEAPNYQVDL K