| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2115 |
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| Symbol | |
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| ID | 4459574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2587182 |
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| End bp | 2588162 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639702882 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_846233 |
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| Protein GI | 116749546 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000423948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000794083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCAAAAT CCAAGAAAAG CAAACGAGGC GGAGTCAGCC CGGATCGCGG CGATCCGCAC
GAGGCGGGAG AAGAATCCCG TTCCGGCTCC ACTTTTCCGG CGGAGAGGCC GCAGGCCGTT
TCGTTTGACC CGTTCCGCAT CTACCTCGAC GAGATCAAGC GATACCCCCT TCTCAGCAGG
GAGGAGGAAA CGGATCTGGC CATCCGGTAC CGTGAGAAAG GCGATATTGA AGCCGGCTAC
AAGCTGATCA CCGCCAACCT GAGACTGGTT GTAAAGATAG CCATGGATTT TCAGAGGTAC
TGGATGCAGA ACCTCATGGA TTTAATCCAG GAGGGGAACG TCGGCCTGAT GCAGGCCGTC
AAAAAATTCG ACCCGTACCG CGGATATAAG TTTTCCTACT ATGCTTCGTT CTGGATCAAG
GCCTACATCA TCAAGTTCAT CATGGACAAC TGGAAGCTTG TCAAGATCGG CACCACCCAG
GCACAGCGGA AGCTGTTCTT CAACCTGCGC AAGGAGAAGG AGCGGTTGGA AGCGCAGGGA
ATCGAAGCTT CGCCGAAGCT CCTCAGTCAC CGGCTGGACG TCAAGGAATC CGAAATCATC
GAGATGGATC AACGGCTGAA TAGCTGGGAG ATCTCTTTGG ACAGCCCGCT CAAGGAAGAT
TCCGAAGACA CGCACAAGTC TTTCCTCCCC TCCGACGATC TTCCCGTCGA CGATCAGATC
GCAGACCGGG AAGCGAAGGC TATCCTGCAT GACAAGCTCC TGCTCTTTCG GGAACAGCTG
AAAGGCAAGG AGGCGGTCAT TTTCGACAAA CGGCTGCTGA CCGAAGAGCC CATGACCCTG
CAGGAGATAG GAGACCGTTT CGGAATCAGC CGCGAACGGG TCCGGCAGAT TGAAAGTCGT
TTGAAGAAGA AGCTCAAGGC ATACCTGGAA GAAGAAATCG AGGACATCGA TCTGCTTCAG
GAGAGCATGG TCGAAGTCTG A
|
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| Protein sequence | MPKSKKSKRG GVSPDRGDPH EAGEESRSGS TFPAERPQAV SFDPFRIYLD EIKRYPLLSR
EEETDLAIRY REKGDIEAGY KLITANLRLV VKIAMDFQRY WMQNLMDLIQ EGNVGLMQAV
KKFDPYRGYK FSYYASFWIK AYIIKFIMDN WKLVKIGTTQ AQRKLFFNLR KEKERLEAQG
IEASPKLLSH RLDVKESEII EMDQRLNSWE ISLDSPLKED SEDTHKSFLP SDDLPVDDQI
ADREAKAILH DKLLLFREQL KGKEAVIFDK RLLTEEPMTL QEIGDRFGIS RERVRQIESR
LKKKLKAYLE EEIEDIDLLQ ESMVEV
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