Gene Sfum_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2113 
Symbol 
ID4459572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2585047 
End bp2586513 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content60% 
IMG OID639702880 
Productglycogen/starch synthases, ADP-glucose type 
Protein accessionYP_846231 
Protein GI116749544 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0297] Glycogen synthase 
TIGRFAM ID[TIGR02095] glycogen/starch synthases, ADP-glucose type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0437191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000100698 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAATATC CCGGCGTTCT TTTCTGCGCA TCCGAAGTGT CTCCCTATGC CAAGACGGGA 
GGGCTGGCCG ATGTCGCGGG CGCCCTTCCC GCCGCTCTGC AGGGGCTGGG ATGCGATGTT
CGCATTTTCA TGCCGCTGTA TCGGTCCGTG CGGGAGCAGG AACATCCCCT CACCCCGCTG
GCCCGAAATC TGTCCGTCCC CGTGGGCGTG CACGACTACA CCGTCCACCT TTGGGAAAGC
CGCACCGCCG CGGGAGTTCC GGTCTACTTC CTTGAAAAGG ACGAGTTTTT CGACCGTGGG
TTTCTCTACG GGACTCCGAC CACGGGAGAC TATGAAGACA ACGCCGAGCG ATTCGTCACT
TTCTGCCGCT CGGCGTATCT CCTCTGCAAT CGTCTGAACT GGTATCCTTC GGTTTTCCAC
CTTCACGACT GGCAGACCGG CCTTGCCGCG GCCTATCTCG ATCGCCTCCG GCGCCGTGAT
TCGAACTTTG CGCACTCCGG GGCACTGTTC ACGATTCACA ACCTGGCCTA CCAGGGAATC
TTTCCCGCCG TCCATTTCGG ACTCACCGGT CTGCCGGCGG AGGCTTTCTC ACCGCAGGGC
ATGGAATTCT GGGGCAACTG CAATTTTCTC AAGGCCGGAT TGGTCTACAG TGACATTCTA
ACCACTGTAA GTCGCGGATA CAGCCTGGAA ATACAGACCG CGGCATTGGG TCACGGCCTG
GACGGGGTGC TCCGTGAGCG CCGCGATCGG CTTCATGGCA TCCTCAACGG CATCGACACC
GAAGCCTGGA ACCCGGAGAC GGACCCCTTG ATCCCATGCC GTTACAGCGC AACGGACCTT
TCCGGCAAGC GCCGGTGCAA GAAAGAACTG ATCGCGGAAC TGGGCCTGCC CGCAGAAAGT
CGCGAGACCC CTCTGCTGAG TATGATCAGC CGTCTTGCGG GCCAGAAGGG ATTCGATCTC
ATCGAAGACA TCATGAATGA CCTGATGGAA CTGCCCTTGT CCCTGGTGAT CCTCGGTACC
GGCGACGCGC TCATCGAGCG GCGGCTGAAG GAATTCGCCA ATTTGTATCC GGAGAAGCTC
CGCATGCTCG CCTGCTTCGA CGAATCGCTC GCACATCGTA TCGAAGCCGC ATCGGACATC
TTCCTCATGC CGTCGCGCTA CGAACCCTGC GGGCTCAACC AGATGTACAG CCTGCGCTAC
GGAACCGTCC CCGTAGTGCA TGCCACGGGA GGCCTGGACG ATTCCGTGAT CGACGTCATG
GAGCACCCCG AATCCGGAAC CGGGTTCAAG TTCCGCGAGT ATCGCGCCTC GAATCTGCTG
GAAACGGTGA GCGCCGCGCT GGCCTTCCAC CGGGAAAAGG AAAAATGGAC GGCGATGCAG
CGCAGGGGAA TGTCTCAGGA TTTTTCATGG ACCCGCTCCG CCGGCGAGTA TCTCGATCTC
TACCGGTTGA TCGCCGCAAG GAAATAG
 
Protein sequence
MKYPGVLFCA SEVSPYAKTG GLADVAGALP AALQGLGCDV RIFMPLYRSV REQEHPLTPL 
ARNLSVPVGV HDYTVHLWES RTAAGVPVYF LEKDEFFDRG FLYGTPTTGD YEDNAERFVT
FCRSAYLLCN RLNWYPSVFH LHDWQTGLAA AYLDRLRRRD SNFAHSGALF TIHNLAYQGI
FPAVHFGLTG LPAEAFSPQG MEFWGNCNFL KAGLVYSDIL TTVSRGYSLE IQTAALGHGL
DGVLRERRDR LHGILNGIDT EAWNPETDPL IPCRYSATDL SGKRRCKKEL IAELGLPAES
RETPLLSMIS RLAGQKGFDL IEDIMNDLME LPLSLVILGT GDALIERRLK EFANLYPEKL
RMLACFDESL AHRIEAASDI FLMPSRYEPC GLNQMYSLRY GTVPVVHATG GLDDSVIDVM
EHPESGTGFK FREYRASNLL ETVSAALAFH REKEKWTAMQ RRGMSQDFSW TRSAGEYLDL
YRLIAARK