| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2112 |
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| Symbol | |
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| ID | 4459571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2583487 |
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| End bp | 2584566 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702879 |
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| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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| Protein accession | YP_846230 |
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| Protein GI | 116749543 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.319064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000802452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGAATCCTC TACAAAGACA AACCACTCGA CAGCTATCGA TCGGCGGGGT TCTCATCGGG
GGAGGCGCCC CGGTCGTGGT CCAGTCCATG ACCAACACGG ATACCAGGGA CTGGCGTTCC
ACCGTGGCGC AGATCGAGAG GCTCCATGAG GCGGGATGCG AGCTCGTGCG CGTGGCCGTG
CCGGATGATC AGGCCGTTGA ACAGCTTTCC CGGATCAAGA AGGCCATTGG GATCCCGCTC
ATTGCGGACA TCCATTTCGA TCACCGCCTC GCACTGGGCG CAATCAAGGC CGGAGTGGAC
GCGCTGCGGC TGAATCCCGG CAACATCGGC GGCCCCGACA AGGTGCGCAA GGTCGCGGCG
GCGGCGCGGG AAAGGGGGAT CCCCATCCGT ATCGGCGTCA ACAGCGGCTC GCTCGAAAAG
GAATTGCTCG CCCGCCACGG CCATCCGACT CCGGAGGCAA TGGTGGAGAG CGCGCTCAAA
CACGTTCGAC TCCTGGAAGA TCACGATTTC GATCTCATCA AGATTTCCCT GAAATCGTCG
GACGTGCTCA ACACGGTTGC CTCATACCGC CTGCTGTCGT CCCGGACGCG CTACCCGCTG
CACCTTGGCG TAACCGAAGC GGGGACCCTG GTGGACGGAG CCGTCAAGTC GGCCCTGGGG
ATCGGCATCC TGCTGTTCGA CGGGATTGGG GACACGCTGA GGGTTTCGCT CACGCGGGAT
CCGGAGGACG AAATACCGGT GGCCTACGGT ATTCTCCGCT CACTGCGGCT GCGCGACCGC
GGAGTGGAGC TCGTGAGCTG TCCGACCTGC GGCAGGACGG AGATCGATCT CATCCCGATG
GTGGAAGAGA TCGAAAGGCT GCTGAGAAAA GTGCGCACCC CGCTGAAAGT GGCCGTTATG
GGATGCGTGG TGAACGGGCC CGGAGAAGCG CGGGAAGCGG ACGTGGGAAT TGCCGGAGGG
CGCGGAAAGG GAATTTTGTT CAAGAAAGGG GAGCGGATTG AAACGGTTCC AGAGGCGGAG
CTGATGAAGA GGCTGCTGGT TGAAATCGAG AAAATGACCG GCGAAAGGAT CATGGGGTGA
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| Protein sequence | MNPLQRQTTR QLSIGGVLIG GGAPVVVQSM TNTDTRDWRS TVAQIERLHE AGCELVRVAV
PDDQAVEQLS RIKKAIGIPL IADIHFDHRL ALGAIKAGVD ALRLNPGNIG GPDKVRKVAA
AARERGIPIR IGVNSGSLEK ELLARHGHPT PEAMVESALK HVRLLEDHDF DLIKISLKSS
DVLNTVASYR LLSSRTRYPL HLGVTEAGTL VDGAVKSALG IGILLFDGIG DTLRVSLTRD
PEDEIPVAYG ILRSLRLRDR GVELVSCPTC GRTEIDLIPM VEEIERLLRK VRTPLKVAVM
GCVVNGPGEA READVGIAGG RGKGILFKKG ERIETVPEAE LMKRLLVEIE KMTGERIMG
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