| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2111 |
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| Symbol | |
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| ID | 4459570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2581157 |
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| End bp | 2583307 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702878 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_846229 |
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| Protein GI | 116749542 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00796339 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000110478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCGGTTTT TTGAAATCAG GGACCAGATG CTCAGCTACT ATCCGAGCTC GGACAGTTCC
CTGCTCGAAA AGGCGTACAT CTACGTCGCA TCCATACATC GCGGCCGGGT CCGATTGCCC
GGGGAGCCTT ACTTGAACCA CTCTCTTGCC GTGGCCGGCA TTCTCGCCCA GATGCGCCTG
GATGAGGAGA GCATCGCATC GGGTCTCCTG CATGACGTCG TCGAAGACAA GTACGCGAAT
ATCGATGAGG TGCGGGAGCT ATTCGGCCCC GGCGTGGCGG GCATCGTTCA GGGCGTGACC
AAGCTCAGCC GGCTTAGTTT CAGCAGCCGC GAGGAACGCC AGGCCGAGTA TATTCGCAAG
ATGATCCTCG CCATGTCCCA GGACGTCAGG GTGATCCTGG TCAAGCTGGC GGACCGCCTT
CACGACATGC GCTCACTGCA CTCCGGAACG AGAGGCTCCG GAAATTCCAT GGCTCAGGAA
ACGTTCGATA TTTACGCGCC GCTTGCGGCC CGGCTTGGAA TTGACTGGAT GAAGCAGGAA
CTGGAGGACC TGGCCTTCCG GTGCAAGGAG CCCGAGTCTT ACGAGGAAAT CCTCGGGAAG
CTGGAGAAGA CCCAGGAGGA ACGCAGGCGC TACATCGAAG ACGTCATGAG CATCCTGAAC
GCCCGACTGG AGGAGCACGG CATCAAGGGA CGGGTCAACG GGCGATCCAA GCACCTTCAC
AGCATCTACC AGAAGATGAT CCGGCAAAAC CTCGACCTGA ACCGGGTGTA CGACATTATC
GCATTTCGAA TCATCGTGGA TTCCGTGAAG GCGTGCTATG AGGCTCTGGC GATGATCCAT
GCGCTCTGGG AGCCGGTTCA GGGACGATTC AAAGACTATA TCGTGAAGCC GAAGTCCAAC
ATGTACCAGT CGCTGCACAC CACGGTCATC GGGCCTTACC ATGAAAGGAT GGAAGTCCAG
ATCCGCACGG AGGAAATGAA CCGGATCGCC AACGAGGGAA TCGCCGCGCA CTGGCTCTAC
AAGGAAGGCC GTCCCCTGGG AAAGATCGAC GAGCAGGAGA CCCAGCGCTT TTCCTGGCTT
CGCGAGCTGA TGGAATGGAA CAAGGACTGG CGCGATCCCA AGACCTTCTT CGATGCGGTC
AAAGTCAATT TCTACCCCGA CGAGGTCTAC GTCTTCACTC CCCAGGGCGA AATCAAGTCC
TTTCCCCGAG GGTCCACTCC CGTGGATTTC GCTTACGAAG TCCACACCGA GGTGGGGCAT
CGTTGCGTGG GGGCGCGGGT GAACGGCAAG CTGGTCCAGT TGCGCTACGA GCTCCAGACC
GGGGACACCA TCGAGATCCT GACCGCCGCC AATCACCGTC CCAGCAAAGA CTGGCTCAAA
CAGGTGAAGA CGAGCAAGGC GATCAACCGG ATTCGCCATT GGTTCAAAGC AGAAGAACGG
GAACGGTCGA TTTCCCTTGG CAGGGAGTTT TGTGAGCGGG AATTTCGCAA GAAGGGCCTC
AACTTCCACA ATTACCTGAA TTCCAACGAG CTTCTCGAGG CGGCAAGGGG CTTTTCGCTC
CGCTCCGTGG ATGATCTGCT GGCGGCTGTC GGCTACCGAA AGGTTTCGCC CGTCCAGGTG
ATCGGGAAAC TGCCTTCCAA GATGGAAATC GAGGAAGCCG CAAGGGAAGA CACCATCCCG
GTCGAGAAAC GCAGAACCGC TCACGGGGAT GAGGGCGTCA AGGTCAGGGG GGTGGACGAC
GTCATGATCC GCATGGCCAA GTGCTGCAAT CCCGTTCCGG GCGAGGAAAT CGTCGGCTAC
ATCACACGGG GGCGGGGAAT CACCGTGCAC CGGGTCCAGT GCAACAACAT CGGGCGCGGG
GATGCCGAGC GAAAGATCGA CGTCCAGTGG GACAGCGGGG GCGGCCAGGT CTATCCCGTG
GATATCAAGA TCACCCATGC GTCCGACAAG GGAATACTCG CCGGACTGAG CGCCGTGCTG
GGCCAGTTGG ACGCCAATGT TGTGGACATC CAGGTCGAGC CTCCGGGAGG CTACAACCTC
GGAGCGTGCC GGCTGAAAAT CGAAGTGAAA GACACCAAGC ACCTGCAACG AGTGCTCTCC
GCGTTGAGAG CGGAAAAGGG CGTGTATCGC GTGCAGCGCA GCATGGAATA G
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| Protein sequence | MRFFEIRDQM LSYYPSSDSS LLEKAYIYVA SIHRGRVRLP GEPYLNHSLA VAGILAQMRL
DEESIASGLL HDVVEDKYAN IDEVRELFGP GVAGIVQGVT KLSRLSFSSR EERQAEYIRK
MILAMSQDVR VILVKLADRL HDMRSLHSGT RGSGNSMAQE TFDIYAPLAA RLGIDWMKQE
LEDLAFRCKE PESYEEILGK LEKTQEERRR YIEDVMSILN ARLEEHGIKG RVNGRSKHLH
SIYQKMIRQN LDLNRVYDII AFRIIVDSVK ACYEALAMIH ALWEPVQGRF KDYIVKPKSN
MYQSLHTTVI GPYHERMEVQ IRTEEMNRIA NEGIAAHWLY KEGRPLGKID EQETQRFSWL
RELMEWNKDW RDPKTFFDAV KVNFYPDEVY VFTPQGEIKS FPRGSTPVDF AYEVHTEVGH
RCVGARVNGK LVQLRYELQT GDTIEILTAA NHRPSKDWLK QVKTSKAINR IRHWFKAEER
ERSISLGREF CEREFRKKGL NFHNYLNSNE LLEAARGFSL RSVDDLLAAV GYRKVSPVQV
IGKLPSKMEI EEAAREDTIP VEKRRTAHGD EGVKVRGVDD VMIRMAKCCN PVPGEEIVGY
ITRGRGITVH RVQCNNIGRG DAERKIDVQW DSGGGQVYPV DIKITHASDK GILAGLSAVL
GQLDANVVDI QVEPPGGYNL GACRLKIEVK DTKHLQRVLS ALRAEKGVYR VQRSME
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