| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2104 |
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| Symbol | sdhA |
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| ID | 4459598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2573097 |
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| End bp | 2574821 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639702871 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_846222 |
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| Protein GI | 116749535 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0119641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCA AACACGACGT CGTCATCGTC GGAGCCGGCC TGGCCGGACT TCGAGCCGCC
ATCGAGGTGG CCGGGAACGC GGACGTCGCC CTGATCAGCA AGGTCTATCC CACACGCTCC
CATTCCGGGG CGGCCCAGGG AGGCATTGCC GCCGCGCTGG GCAACGAGGA GCCGGATTCC
TGGGAGTGGC ACATGTACGA CACGGTCAAG GGGGGCGACT ACCTGACCGA CCAGCACGTG
GCCGAGATAC TGGCCAAAGA CGCTCCCAGG GCGGTGTACG AACTGGAACA CATGGGGGTT
CCCTTCAACC GCACCGCCGA AGGCAAGATC GCGCAGCGCG CCTTCGGCGG CCACACCCGG
GATTTCGGGC AGGCCGCGGT GAAACGGGCC TGCTACGCGG CGGACCGCAG CGGCAGGGTG
ATGATGGATA CCCTGTACTT CGAGGCCGTG CGCAAGGGAA TCCGGATCTA CCCGGAATTC
CAGATGCTGG ACCTGGTCAT GAAGGACGGC GCGGCCGTCG GGTTGATCGC CCTGGAGATC
GCCACCGGGG AAGTGCATTT CTTTCACTGC AGGATCTTGC TGCTGGCCAC GGGCGGTTTC
GGCAAAGTCT ACAAGACCAC CTCGAACGCT TTCGCGAGCA CGGGCGACGG CGTCGCGTGC
GCATACCGAA ATGGAATCCT CCTGGAAGAC ATGGAATTCG TGCAGTTCCA TCCGACGGGA
CTCTACGGCC TCGGGGTGCT CATCAGCGAG GCCGCCCGCG GGGAAGGGGG AGTGCTCCGG
AATGCCGCCG GCGAGCGTTT CATGGAACGC TACGCGCCGA CCATCAAGGA TCTCGCTCCG
CGCGACATGG TGTCGCGGGC CATCTTCACG GAGATTCGGG AAGGGAGGGG AATCGACGGC
CGGGACTACG TGCACCTCGA TCTGACGCAC CTGGGGGAGT CGAAGCTCAA GGAGAAGCTC
TCCGACATCA GTTCCTTCAT CAAGATCTAC CTCGGCCTCG ATCCCGCAAA AGACCTTGTT
CCCACGCAGC CCACCTGCCA CTACATGATG GGCGGAATCC CGGTCACCGT CGACGGGCGG
GTCCTGGGCG CCGGCGAACG GATCGTTCCC GGCCTGTATG CGGCCGGCGA ATGCTCCTGC
ATCTCCCTGC ACGGCGCCAA CCGCCTCGGC TGCAATTCGC TGCTGGATCT CGTGGTGTTC
GGCAGGAGGG CCGGCATCGC GATGGCCGAA AACGTCCGCG AGCTCCCCTG GATCGATCCG
CCCGACAGTC CCGAGCGGAA GGTGCGGGCC GGGATCGAAG GGCTTCTCGG CCGTTCCCCG
GGCGGCGGGA AGGTCGCCAG GCTGCGCGGT GCCATGCAGC AGGCCATGAC CGCCCACTGC
TCGGTCTTTC GCGACGAAGG GAGCCTTGCC GAAGGGCTTT CCCTGATCCG GTCGCTTCGA
GAGGAATATG CCGGGATCGG TATCGACAAC CAGGGTAAGC GCTTCAACAG CGACCTGCTG
GAGGCCCTCG AGCTGGAAGG GCTGCTGGAC ATCGCCGAAG CGATCGCGGT TTGCGCGCTC
GCGCGCCGGG AAAGCCGGGG AGCGCACAGC CGGGAGGATT ACCCGGAACG CGACGATGCC
CGATGGCTCA AGCACACCCT CGTGCTCAAA ACCGCCAACG GTCCCGAGGT GTCCTACAAA
CCCGTTACCA TAACCCGATT CGAACCGAAG CCGAGGGCGT ACTGA
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| Protein sequence | MHFKHDVVIV GAGLAGLRAA IEVAGNADVA LISKVYPTRS HSGAAQGGIA AALGNEEPDS
WEWHMYDTVK GGDYLTDQHV AEILAKDAPR AVYELEHMGV PFNRTAEGKI AQRAFGGHTR
DFGQAAVKRA CYAADRSGRV MMDTLYFEAV RKGIRIYPEF QMLDLVMKDG AAVGLIALEI
ATGEVHFFHC RILLLATGGF GKVYKTTSNA FASTGDGVAC AYRNGILLED MEFVQFHPTG
LYGLGVLISE AARGEGGVLR NAAGERFMER YAPTIKDLAP RDMVSRAIFT EIREGRGIDG
RDYVHLDLTH LGESKLKEKL SDISSFIKIY LGLDPAKDLV PTQPTCHYMM GGIPVTVDGR
VLGAGERIVP GLYAAGECSC ISLHGANRLG CNSLLDLVVF GRRAGIAMAE NVRELPWIDP
PDSPERKVRA GIEGLLGRSP GGGKVARLRG AMQQAMTAHC SVFRDEGSLA EGLSLIRSLR
EEYAGIGIDN QGKRFNSDLL EALELEGLLD IAEAIAVCAL ARRESRGAHS REDYPERDDA
RWLKHTLVLK TANGPEVSYK PVTITRFEPK PRAY
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