Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2102 |
Symbol | fumC |
ID | 4459596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2570765 |
End bp | 2572144 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639702869 |
Product | fumarate hydratase |
Protein accession | YP_846220 |
Protein GI | 116749533 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.306021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0112953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGAGA GAGCGGAGGA AGACGCGCTC GGAACGGTGA TGGTTCCCGA AGACGCGTAC TACGGGGCGC AGACCCGGCG GGCGCTCGAC AATTTTCCCG TGAGCGGCTT TTCCTTCCCG CCGTCCTTTA TCAGGGCGCT CGGCCTGGTG AAGAAAGCTG CGGCCATGGT CAACCGGGAC CTCGGGCTGC TTGACGCCGA CCTGGCCGAG GCGGTCATCG AGGCCGCGCG GGAAGTGGCG GACGGCAGGC TGGACGGCCA GTTCGTGCTC GATGTCTTCC AGACCGGCTC CGGGACCTCG ACCAACATGA ACGCCAACGA GGTGATCGCG GGGCGCGCCA ACGAGATCCT CACCGGGAGG AGGGGCGGCA AGAGCCCGGT GCACCCGAAC GATCACGTGA ACAAAGGGCA GTCCAGCAAC GACGTCATCC CGTCGGTGAT CCACATCGCC GCCCTGCTCA CCCTGCGCCG GCGCCTCATC CCCTCCCTGG AGGCGCTGCA CCGGAGCCTG AACGAGAAGG CCCTCGAATT CGCCGGGGTG CTCAAGATCG GCCGGACGCA CCTTCAGGAC GCCGTGCCCA TGAGCCTCGG GCAGGAGTTC TCCGGCTACG CCCGCCAGGT GGAACTGGCG ATCGAGAGGG TGAAACGCAT CGAGCCCGCC CTCGGCGAGC TGGCGCTGGG CGGAACCGCG ATCGGCACGG GCCTGAACAC CCATCCGGAA TTCGCCGGGC GGGTCATCGC CGTCATCGCG CGGGAGACGG GCTGTCCGTT CCGGGAGGCG GTGAATCACT TCGAGGCCCA GGCCGCGCAG GATGCCGCCG TGGAGGCCGG CGGCGCGCTG AAGACCGTCG CCGTGAGCCT CGCCAAGATC GCCAACGATT TGAGGTGGCT CGCTTCCGGC CCGCGCTGCG GCCTCGGTGA GATCAACCTG CCTTCCCTGC AGCCCGGGTC CTCCATCATG CCCGGAAAGG TGAACCCGGT CATCCCCGAG GTCGTGCTGC AGGTGGCGGC GCAGGTCATC GGCAACGACG CCGCCGTGAC CTTCGGGGCG CAGGCCGGCA ACTTCGAGCT CAACACCATG CTGCCCCTGA TCGCCCACAA CCTGCTGCAG TCCGTCGAAC TGCTGAGCTC CGCCGCCTCC CTGTTCGCAT CGAAATGTGT CGCCGGGATC ACGGCGAATC GTGAAAAGAG CGCGTCCAAC ATCGAGCGGA GCCTCATGCT CTCCACCTAC CTGGTGCCCG CAATCGGCTA CGACCGGGCG TCCGCCGTCG CCAGGGAAGC GCACCGGACG GGGAAAACCA TCCGGGAAGT GGTGCTGGAG CAGGGATTGA TGTCTCCGGA ACGGATCGAC GATCTCCTTG GAAAGATTCC AATCGCCTAA
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Protein sequence | MRERAEEDAL GTVMVPEDAY YGAQTRRALD NFPVSGFSFP PSFIRALGLV KKAAAMVNRD LGLLDADLAE AVIEAAREVA DGRLDGQFVL DVFQTGSGTS TNMNANEVIA GRANEILTGR RGGKSPVHPN DHVNKGQSSN DVIPSVIHIA ALLTLRRRLI PSLEALHRSL NEKALEFAGV LKIGRTHLQD AVPMSLGQEF SGYARQVELA IERVKRIEPA LGELALGGTA IGTGLNTHPE FAGRVIAVIA RETGCPFREA VNHFEAQAAQ DAAVEAGGAL KTVAVSLAKI ANDLRWLASG PRCGLGEINL PSLQPGSSIM PGKVNPVIPE VVLQVAAQVI GNDAAVTFGA QAGNFELNTM LPLIAHNLLQ SVELLSSAAS LFASKCVAGI TANREKSASN IERSLMLSTY LVPAIGYDRA SAVAREAHRT GKTIREVVLE QGLMSPERID DLLGKIPIA
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