Gene Sfum_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2089 
Symbol 
ID4459583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2554467 
End bp2554937 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID639702856 
Producttranscription elongation factor GreA 
Protein accessionYP_846207 
Protein GI116749520 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.176469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.347146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAG TACCGATTAC CAAGGAAGGA TTTGAGCGCC TGAAGATCGA GTTGCAGAGG 
CTCCAGCGAG ACGAGCGGCC GATGGTGATC AGAGCGATCG AGGAAGCCAG GTCGCACGGA
GATATTTCGG AGAATGCCGA GTACGAGGCG GCCAAAGAAA AACAGGCCAT GATCGAAGGC
CGGATTCAGG ACCTTTGCCA GAAGATGGGC GAATGCGAAA TCGTCGAACC ATCGGATAAC
GACAACGGCC GGGCGATTTT CGGCTCCACC GTGGTGGTGG AAGACACCGA AACCGGGGAA
GTCACCTCTT ATCGCCTCGT GGGACCTTAT GAAGCCGACG TCCAGTCGGG CACCATATCG
GTGGTATCCC CGCTGGGCAA AGCGCTGATC GGCAAGGAGG AAGGCGAGGA AATCCGGGTG
CAGACTCCCA AGGGGGTCAG GAACATCGAA GTGCTCGAGA TTCGCAACTG A
 
Protein sequence
MPRVPITKEG FERLKIELQR LQRDERPMVI RAIEEARSHG DISENAEYEA AKEKQAMIEG 
RIQDLCQKMG ECEIVEPSDN DNGRAIFGST VVVEDTETGE VTSYRLVGPY EADVQSGTIS
VVSPLGKALI GKEEGEEIRV QTPKGVRNIE VLEIRN