Gene Sfum_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2084 
Symbol 
ID4459613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2549682 
End bp2552171 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content62% 
IMG OID639702851 
Productleucyl-tRNA synthetase 
Protein accessionYP_846202 
Protein GI116749515 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.276133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.470316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATA AATATGCACC GAAGCGTATC GAGAAGAAAT GGCAGGAACA TTGGGAACGG 
GAAAAGCTCT TCGAGGTTTC CGAGATTCCC GGCCGGGAGA AGTTCTATCT CCTGGAAATG
TTCCCCTATC CCTCGGGGCG CATCCATATG GGGCACGTCC GCAACTATTC GATCGGGGAC
GTGGTCGCCC GCTTCCTGAG GATGCGGGGC TACAATGTGC TGCACCCCAT GGGGTGGGAC
GCGTTCGGCA TGCCGGCCGA AAACGCCGCG ATCAAGGCGA AAACCCACCC TGCCCGCTGG
ACCTACGAGA ACATCGCGTA CATGCGCAGC CAGTTGAAGC AATTGGGATT TTCCTACGAC
TGGTCCCGCG AATTCGCCAC CTGCGACGTG TCCTACTACC GCTGGGAGCA GCTGTTCTTC
CTGAAGATGT ACGAAAAGGG GCTGGCGTAC AAGCGCAGCG CGTACGTCAA CTGGTGCGGC
ACCTGCCTGA CGGTCCTCGC CAACGAGCAG GTCGAAGGCG GGGCATGCTG GCGTTGCGAC
CAGCCCGTGG TCCAGAAGGA AATGGAACAG TGGTTCTTTA AAATCACCGA TTACGTGGAA
GAACTGCTGG ATTATACCCA CCGGCTGCCG GGCTGGCCGG AGCGGGTGCT CACCATGCAG
CAGAACTGGA TCGGCAAGAG CCTTGGAAGC AAGCTCCTGT TTCCCCTGGC ATCCGGGGAC
GGTTCCATCA CGGTGTTCAC CACGCGCGCC GACACGCTCT TCGGGGCGAC GTTCATGAGC
CTGGCCCCCG AACACCCCCT GGTGGAGGGG CTCTGTCGTG GAAATCCCCA GGAATCCGAA
GTGCTGCGGT TCGTCCAGGC CGCCAAGCAG GCGAAGCGCA ACGACCGTGA GGCCGAGCTG
CTCGAAAAGG AGGGGGTTTT CACCGGAAGC TGCTGCATCA ACCCGGTCAC CGGGGCGAAA
ATGCCGATTT ACGTCGCCAA CTTCGTGGTG ATGGAATACG GTACGGGAGC GGTCATGGCC
GTTCCCGCCC ACGATCAGCG CGACTTCGAA TTCGCGCGCA AATACGGGCT GCCCGTCAAG
GTGGTCATCA AGCCGGCCGA TGCGGCGGCC GCTCCGGCCG CGCAGGAACT GTCCGCGGCC
TTCGAAGACG ACGGCGTGCT GGTCGATTCC GGCGCGTATT CGGGCATGGC GTCCGCCGAG
GCCCGCACCG CCATCACCGC GGACCTGGCC GGGAAGGGCC TCGGGGAGCA AACCGTCCAG
TACCGGCTGA GAGACTGGGG GATTTCACGT CAGCGTTATT GGGGTGCCCC CATCCCGATC
GTCTATTGCG ACAAGTGTGG AACCGTTCCC GTTCCCGAAA AGGATCTGCC GGTGGTTCTG
CCGACGGACG TCGCGCTGCT GCCCAACGGC GCCTCCCCCC TTCCGGCGCA CGCTCCTTTC
CTCAACACCG ACTGTCCGCG TTGTGGCGGT CCCGCACGCC GGGAAACGGA CACCATGGAC
ACCTTCGTGG AATCGTCCTG GTATTTTGCC CGGTTTGCGT GTGCGAGGTA CGATCAGGGG
CCGCTCGATC TGCCCAAAGT CAAGTACTGG ATGCCCGTGG ACCAGTACAT CGGCGGCATC
GAACACGCCG TGCTCCACCT GCTGTATTCG CGTTTCTTCG TGAAGGTGCT GCGGGACATG
GGGGCGCTCG AGGTCGACGA ACCCTTCAGG AACCTGCTCA CCCAGGGCAT GGTGATCAAG
GACGGGGCCA AGATGAGCAA GTCCAAGGGG AACGTGGTGG ACCCGGACGA CATGATCAAG
GCCTACGGCG CGGACACGGT GCGCCTCTTC TGCCTGTTCG CCTCCCCGCC CGAAAAGGAT
CTGGAATGGA GCGACCAGGG CGTGGAAGGG TCATTCCGGT TCCTGTCCCG GATCTGGCGA
CTGGTTTCCG ACAATCTCGA CGCCTTGCGG TCCGCGCCGC GCCACAACGG CGGCGGAGCG
CTTCCGGAAC CGCTTGAAGC CCTGCATCGC AAGACGCACC AGACCATCAA GAAGGTGACC
GAAGACATCC GGGACCGCTT CCATTTCAAC ACGGCCATCG CGGCGATCAT GGAACTGGTG
AACCAGATTT ACCAGGTGGT GGAAGGCGGC TCCAGGGCCG GGAACATCTG GCCGGTGGTG
AAGGAGGCGG TGGAGGCGCT GATCCTGCTC GTCTCTCCCA TGGCGCCGCA CATCGCCGAA
GAGATCTGGC ACGAACTGGG ACATACCCGA AGCGTTCTGC TCGAACCCTG GCCCGAATGG
AGCGGGAAAG CCCTGCAGGC CGAAGAAGTC ATGCTCGTGG TGCAGGTGAA CGGGAGACTG
CGCAGTCGGA TCACCGTTCC CTCCGACGCG ACCCCGGAGC AGATGGAAGC GGCCGCGCTG
GCCGATTCCC GCGTGCAGGA ATTCATTGCC GGAAAGCCGG TGAGGAAGGT CGTCGTCGTT
CCGAAAAAGA TCATCAACGT CGTCGTATAG
 
Protein sequence
MDYKYAPKRI EKKWQEHWER EKLFEVSEIP GREKFYLLEM FPYPSGRIHM GHVRNYSIGD 
VVARFLRMRG YNVLHPMGWD AFGMPAENAA IKAKTHPARW TYENIAYMRS QLKQLGFSYD
WSREFATCDV SYYRWEQLFF LKMYEKGLAY KRSAYVNWCG TCLTVLANEQ VEGGACWRCD
QPVVQKEMEQ WFFKITDYVE ELLDYTHRLP GWPERVLTMQ QNWIGKSLGS KLLFPLASGD
GSITVFTTRA DTLFGATFMS LAPEHPLVEG LCRGNPQESE VLRFVQAAKQ AKRNDREAEL
LEKEGVFTGS CCINPVTGAK MPIYVANFVV MEYGTGAVMA VPAHDQRDFE FARKYGLPVK
VVIKPADAAA APAAQELSAA FEDDGVLVDS GAYSGMASAE ARTAITADLA GKGLGEQTVQ
YRLRDWGISR QRYWGAPIPI VYCDKCGTVP VPEKDLPVVL PTDVALLPNG ASPLPAHAPF
LNTDCPRCGG PARRETDTMD TFVESSWYFA RFACARYDQG PLDLPKVKYW MPVDQYIGGI
EHAVLHLLYS RFFVKVLRDM GALEVDEPFR NLLTQGMVIK DGAKMSKSKG NVVDPDDMIK
AYGADTVRLF CLFASPPEKD LEWSDQGVEG SFRFLSRIWR LVSDNLDALR SAPRHNGGGA
LPEPLEALHR KTHQTIKKVT EDIRDRFHFN TAIAAIMELV NQIYQVVEGG SRAGNIWPVV
KEAVEALILL VSPMAPHIAE EIWHELGHTR SVLLEPWPEW SGKALQAEEV MLVVQVNGRL
RSRITVPSDA TPEQMEAAAL ADSRVQEFIA GKPVRKVVVV PKKIINVVV