Gene Sfum_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2083 
Symbol 
ID4459612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2548061 
End bp2549143 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID639702850 
Productphosphoserine aminotransferase 
Protein accessionYP_846201 
Protein GI116749514 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.60376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAC GCATCTATAA CTTCAACGCC GGTCCCGCCG TCCTGCCGCT ACCCGTGCTC 
GAGGAAATGC AGCGCGAAAT GTTGGATTTT CACGGCTCCG GCATGTCGAT CCTGGAAGTC
AGCCATCGTT CGAAATGGTT TGAAGACGTA CTCGATGAAG CCATCGTTCG GATCAAGCGG
CTTCTCAAGC TGGACGATAC GTATCAGGTG CTTTTCCTGC AGGGCGGGGC CAGCTTGCAG
TTCTGCATGG TCCCGATGAA CTTGGCGCTG CCCGGGAAGC CGGTCTCCTA TGTCGAGACC
GATATGTGGT CCACCAAGGC CATCCAGGAA GCGCGTATCC AGGGCAAGGA AGTCGAGGTC
GCCGCCAGCT CAGGAGACCG CGAGTTCACC TACATACCCG GGCAGGTGAA GGTCCGTCCC
GATTCGGCCT ACCTGCACAT CACGTCCAAC AACACCATCC GGGGGACGCA GTGGCACTCA
TTCCCCGATA CCGGGAACAT CCCGCTGGTG AGCGATATGT CCTCGGACAT CTTCAGCCGG
GTGTTCGATC CGAAGCCTTT CGGGCTCATC TACGCCGGAG CGCAGAAGAA CGCCGGCCCG
GCGGGCGTCA CCCTCGTGAT CGTGCGCGAG GACATGCTGA AGCGGGTTCC CAAAGAACTG
CCGACCATGT TGAAGTACAC CACGTTTTCG GAAAAGAAGT CCATGTTCAA CACCCCGCCC
TGCTTTGCCA TTTACACGGT CAGCCTGGTG ACGAAATGGC TCGAGGAGAC CGTCGGGGGC
ATCGCCAGGA TGGAAGAGCA AAATCGCCGG AAAGGCGAGA CCCTCTACCG CTATCTCGAC
AGCCAGGACT ATTACAGGGG GACGGCGGAA CCCGATTCCC GGTCGCTGAT GAACGTAACG
TTCCGGCTGC CGGACGCCGC CCTGGACAAG TTCGTGAAGG AAGCCACCGC CGCGGGACTC
GGCGGGCTGA AAGGGCACCG TTCGGTGGGA GGTTGCCGGG CGTCCCTGTA CAATGCCACG
CCCCTGGAAG GCGTGGAGGC GCTCGTGGAC TTCATGAAGG AATTCGTGCG AAAGAACGGA
TAG
 
Protein sequence
MAKRIYNFNA GPAVLPLPVL EEMQREMLDF HGSGMSILEV SHRSKWFEDV LDEAIVRIKR 
LLKLDDTYQV LFLQGGASLQ FCMVPMNLAL PGKPVSYVET DMWSTKAIQE ARIQGKEVEV
AASSGDREFT YIPGQVKVRP DSAYLHITSN NTIRGTQWHS FPDTGNIPLV SDMSSDIFSR
VFDPKPFGLI YAGAQKNAGP AGVTLVIVRE DMLKRVPKEL PTMLKYTTFS EKKSMFNTPP
CFAIYTVSLV TKWLEETVGG IARMEEQNRR KGETLYRYLD SQDYYRGTAE PDSRSLMNVT
FRLPDAALDK FVKEATAAGL GGLKGHRSVG GCRASLYNAT PLEGVEALVD FMKEFVRKNG