Gene Sfum_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2082 
Symbol 
ID4459611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2546650 
End bp2547516 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content63% 
IMG OID639702849 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_846200 
Protein GI116749513 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.880254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGA AATACATCTC ATTTCCCGTG GAATACGAGG GCGAATCGAG GTTGGTGATC 
GATGACCGCT CCCTGCTCGA ATGGGCTTCG GAGAAAGGGC GGATTCCGCG CCAAGCCGTG
GCGGAGGCGA TTCGATACGG CATCACCCCG TTGCGCTATC TGAAGAACTT CTCCGCGCTG
AGCCTCGACG AGCAGCTGAA GCTTTGCGAG AGCACGGTTT TCATCTGCGG CTGCGGGGGA
CTCGGAGGGC ACCTGGTCAA CCTGGCGGCG AGGGCCGGGA TCGGGTCGAT CGGGATTGCG
GACAAGGACA TTTTTTTCCC GACGAACCTC AACCGGCAGC TGTTTTGCGA TACCGGGCAC
ATGTCGCGGC CGAAGGTTCA TGTGGCCGAG GAAAGAATAC GGTGCGTCAA TCCGTTCGTG
GATGTAAGGG TCTACCCCCA GGCCGTGGAT GCGGGCAACG CGGAAGAGTT CATCGAGGGT
GCGGACGTCG TGCTCGATGC GCTGGATGAT CTGCCCGCGC GGTTCATCCT GGCCGATGCG
GCCCGCCGAC TGGGAATTCC TTTCGTGCAC GGGGCGGCCG CGGGGTGGTG GGGGCAGGTT
TGCACGTTCC TGCCGGATTC GCCGCTGCGA CTCTCCAGCA TATACGGATC GCGCACGGTA
AAGGACCCGT CGGAGGAGCG GATGGGAGTG CTTGGCCCCA CTCCCGCGGT GATCGCGGGC
CTCCAGGCTT TGGAAGCCAT CCGCATTCTT GCGGGCAGGC AACCCGCCTA CGCAGGCCGG
CTGCTCTATT TTGACGGTGA AACGGGGGCG ATGGAAATCG TCCCCCTGGA AAGCCCCGGG
CCCGCGGAGG GGCACGGCCC CGGGTAA
 
Protein sequence
MELKYISFPV EYEGESRLVI DDRSLLEWAS EKGRIPRQAV AEAIRYGITP LRYLKNFSAL 
SLDEQLKLCE STVFICGCGG LGGHLVNLAA RAGIGSIGIA DKDIFFPTNL NRQLFCDTGH
MSRPKVHVAE ERIRCVNPFV DVRVYPQAVD AGNAEEFIEG ADVVLDALDD LPARFILADA
ARRLGIPFVH GAAAGWWGQV CTFLPDSPLR LSSIYGSRTV KDPSEERMGV LGPTPAVIAG
LQALEAIRIL AGRQPAYAGR LLYFDGETGA MEIVPLESPG PAEGHGPG