| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2079 |
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| Symbol | |
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| ID | 4459608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2541980 |
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| End bp | 2543680 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639702846 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_846197 |
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| Protein GI | 116749510 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.674588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCA ATGATTTTTA CGCTCATCTG CTGGGCCTGG CCCCTCCGTG GAAGGTGAAA
TCGGTCGTAC CGAGAGAACG CGCCGATGAG GTGGATGTCT ATCTCGACTA CGAACGAACG
GCCCTCTTTC CCTGTCCCGG GTGTGGCCTG GCGCGTCCCG CGTGTGATCG CTCCCCCGTC
CAAACGTGGC GCCACCTGGA CACCTGCGGA AGAACAACCC GCCTGCACGC CGAGCTTCCC
GTCGTGGATT GTCCCGAACA CGAACGACAG AGTCCGGGCC CTCCGTGGGG AGAAGCGGGG
TTCCCCGTAA CGTTCGCCTT CGAGCGCCTG ATCGCCGGGC TGGCCGGAGA TATCGGCGAT
ATGAGAAAGA CCGCGCGACT ATTCGGTGTG GAGCCGGGTC GAGTGCGCCG GATTCTGCGG
CGCGCTCGAA TGGCGGCGGA GATCGCGGAG GCGGAGAAGA CTCCGGCTGC ACCGGCCGGC
GACACGGGGG GCACGGAGGT CCCGCCTCCC GCGAGGCAGC CGAGGCAACT CCCCCTCTTC
GCCCAAAACG ACTTGAGCTT CATGAACCGG GGCATCCAGG CGTACCGGGC CATGGAGCTG
GACAAGGCCG TCGATCTCTT CAGCAGTCAC CGTCAAACCT ACCCCAACGG GCACGATGCC
GGCTCATGGT CGGCGGCGGC CAAATTCCTG CTCGACGGCA TGCGCGGGGC GCCCCGGGAA
CCGCGTCAAC GCGCGCGGGC TCTGTGCGGC CTCTGGGATG CGCTCGAGGA CCGCATGGAA
TCCGAACGCG CGGGACGGTC CGTCCTGGCG GCGGAGGTCA AACGGGCCTT CTTTTGGCGC
GTGATCGAGG AGCTCGACGG GCATCGCCCG CCGGGCGCCG CGGCGTCACC GCCATCCGCC
CCGCCGCCGT GTACCGGGAC CGAGGATAAG TCTCCCGGAG GGGATGTCCC GTCCATGACC
GAAGATTCCT CATCGGGCGC GGGAGGCGCA CCACCGGAAC CCGCGCGTCC TGCCCGAATG
GGTTCCCCCG TAGCTGCGCC GGATGTGAGC CCGGCTCGCG CCCGCCCCCT TGCGTCCGGT
GCCGCCGGTG CGTCGCTCGT TCTCCCGGGA GGCATTCCCG TCGGATACGT CCTTCTGCAC
GCGGGACGCT ACGACGAGGC GATTCGCAGC CTCCAGAACT CCATCCCCGA AATGCCCCGC
AATGCCGCCG TATACGGCTA CCTCGGCGAT GCGTACAGGC TTCGAGGCGA TCGGAAAACC
GCCCGGCAGT GCTACCTGGA AGCCTGCCTC ATCGACCCCG CGGAGATCGA CTGGCGTCAC
CTGCAGGACG AAGACCTCAA AGAGCTCAAG CGGGAGCTCT CGTTCGATTA CGGATCGGAC
CAGGAACTCG CGGCGGCGTG GCTGCCGAGT CACGCGCGCC TGGAGGGAAT CTTCGAGCCC
AAAGTGGTCC GCGTCAACGA CGGTCTCAAG GAGATGGCGG ACGATTACCT CGAAATGGAA
AAGGCCTGGG CCGGGGAAAA GAATCCCCGC CTCGCGGCAA AGCTCTTCTT TCGAGGCATG
ATCCTTTGCG AAAACGAGGA TAACCTCAGG TTCGTCAAGA AAATCGACCT GATCCAGGTG
CGCCGGGTGA TGAAAGAGGC CAACCCGGTC CTTTTCGGCG ACTTCATGGA AACGATCGCC
GGCAAAAAGC GCTCGCGCTG A
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| Protein sequence | MELNDFYAHL LGLAPPWKVK SVVPRERADE VDVYLDYERT ALFPCPGCGL ARPACDRSPV
QTWRHLDTCG RTTRLHAELP VVDCPEHERQ SPGPPWGEAG FPVTFAFERL IAGLAGDIGD
MRKTARLFGV EPGRVRRILR RARMAAEIAE AEKTPAAPAG DTGGTEVPPP ARQPRQLPLF
AQNDLSFMNR GIQAYRAMEL DKAVDLFSSH RQTYPNGHDA GSWSAAAKFL LDGMRGAPRE
PRQRARALCG LWDALEDRME SERAGRSVLA AEVKRAFFWR VIEELDGHRP PGAAASPPSA
PPPCTGTEDK SPGGDVPSMT EDSSSGAGGA PPEPARPARM GSPVAAPDVS PARARPLASG
AAGASLVLPG GIPVGYVLLH AGRYDEAIRS LQNSIPEMPR NAAVYGYLGD AYRLRGDRKT
ARQCYLEACL IDPAEIDWRH LQDEDLKELK RELSFDYGSD QELAAAWLPS HARLEGIFEP
KVVRVNDGLK EMADDYLEME KAWAGEKNPR LAAKLFFRGM ILCENEDNLR FVKKIDLIQV
RRVMKEANPV LFGDFMETIA GKKRSR
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