| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2069 |
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| Symbol | |
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| ID | 4459649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2530947 |
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| End bp | 2532413 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702836 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_846187 |
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| Protein GI | 116749500 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.349645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGC TTGAACTCAA ACAACAACTG AAACTCAGCC AGCAACTGAT CATGACCCCT
CAGTTGCAGC AGGCGATCAA GCTGCTCCAA CTTTCTCGTC TGGAACTGCT GGAGACCATT
CACCAGGAAC TGGAAACGAA TCCCGTGCTG GAGGAATCCC AGGAGGAATC GGGCGAGGCG
GAGGAGCCGG GGGCCGCGGA AGCCGCCGCG GAGGTCGCGG CGGAAGTCGC CGCCGAACCT
TACCAGGAAG TGGAAATCCT GGAGAAGGTT CGCGAGGACT TCGACTGGGA AGGGTACCTG
GATGAATACA ACACCGGCAC CCCGGTGCTC GTCGAAACCG ATCCGAACAA GGAGTGGCAA
TCCTACGATC AGCGGCTGAC CGTGCCGACC AGCCTGCAGG ACCACCTGGT CTGGCAGATC
AGGCTCTCGG ACATGTCCGA TGAAGAGCGG GAAGTCGCGG GACTCATCAT CGGCAACCTG
AACCGGGACG GCTACCTGGA CGCCTCACTG GACGAAATCG CCGCAATGGG AAAAGTGAGC
ACGGACATGG TGGAACGCGT TCTCGCCGTG GTGCAGCTTC TCGATCCCGT CGGGGTTGCG
GCCCGCGATC CCAGGGAGTG CCTCCTGATC CAGGCCCGCA GCCTGGAGCT CGAGGACGAT
CTGGTGGTCA GGATCGTGGA GCATTACCTG CATTTTCTGG AGAACAGGAA TTATCCCGCG
CTGATCAGGG CGCTCAAGCG ACCCGCGCCG GAGGTCAAAG CCGCAGTCGA CGTCATTCTC
AGCCTGGACC CTCGTCCGGG CAGCAGATTT GCCGAAGAGT CCACGGAATA CATCAGTCCC
GACATCTACG TCATGAAGGT GGACGGTGAA TTCGTGGTGT TGTTGAACGA GGACGGCATG
CCCAAGCTGA AGGTCAGTTC CTATTACAGG CACGCGCTCA CCGAGGACGC GGAGCTGCCT
AGTGAAGCCA AGGAATACAT ACAGGGCAAG CTCAGGTCGG CCGCCTGGCT GATAAAGAGC
ATTCACCAGC GGCAACGGAC CCTGTTCAAG GTCGCTCACA GCATCGTCAA GCTGCAGGCG
GATTTTTTCG AGAAAGGGGT GTCGCACCTG CGGCCGATGG TTCTTCGAGA CGTAGCGGAA
GACGTGGGGA TGCACGAATC CACCATCAGC CGCGTCACGG CGAGCAAGTA CATGCACACT
CCGCACGGGA TTTTTGAGTT GAAATATTTC TTTAACAGTT CCATAAATAG CGTTCTGGGT
GAAGCCGTGG CGTCTGAGAG CGTGAAGGAG CGCATTCGCC AGATCATACG CGAGGAGGAT
CTCGCCAGGC CTTTCAGCGA TCAGGAGATC GTGGAGAAGC TCGAAGGGGA AAACATCAGC
ATTGCGCGGC GCACCGTCGC GAAATACCGG GAAATGCTCG GAGTGCTTCC TTCGAACAAG
CGCAAACGGA CTTCATGGGG TGAATAG
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| Protein sequence | MAALELKQQL KLSQQLIMTP QLQQAIKLLQ LSRLELLETI HQELETNPVL EESQEESGEA
EEPGAAEAAA EVAAEVAAEP YQEVEILEKV REDFDWEGYL DEYNTGTPVL VETDPNKEWQ
SYDQRLTVPT SLQDHLVWQI RLSDMSDEER EVAGLIIGNL NRDGYLDASL DEIAAMGKVS
TDMVERVLAV VQLLDPVGVA ARDPRECLLI QARSLELEDD LVVRIVEHYL HFLENRNYPA
LIRALKRPAP EVKAAVDVIL SLDPRPGSRF AEESTEYISP DIYVMKVDGE FVVLLNEDGM
PKLKVSSYYR HALTEDAELP SEAKEYIQGK LRSAAWLIKS IHQRQRTLFK VAHSIVKLQA
DFFEKGVSHL RPMVLRDVAE DVGMHESTIS RVTASKYMHT PHGIFELKYF FNSSINSVLG
EAVASESVKE RIRQIIREED LARPFSDQEI VEKLEGENIS IARRTVAKYR EMLGVLPSNK
RKRTSWGE
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